KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_16858
Entry
COCSUDRAFT_16858  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K15192  TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_16858
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     COCSUDRAFT_16858
SSDB
Motif
Pfam: SNF2-rel_dom DUF3535 Helicase_C ResIII HEAT_EF3_N PapC_N
Other DBs
NCBI-GeneID: 17040132
NCBI-ProteinID: XP_005646690
JGI: 16858
UniProt: I0YUS7
LinkDB
AA seq 968 aa
MAGLRRGPDPILRRCTAEAMATFVLACTNRTPSPNHRIIMNLCKMACGDPAETPSASAPD
PPDESSSSDGPPASTTDHANGGEAPSQDPTMAAAAVARQGADAALEALASRFGADLLQKL
PRLWEHATAAIATDAAAAIPGRLSPPPAEPQAVIDTLQVLKILGPALDSQLEPQLTSLMP
GLAACCLHERRVLHAAAAACAESLASVQPTCVLPSLLRFVVPMLQGSAADAARSGAVTVV
GRLIARLGLQLVPYTNLIVVPLMGLTSDSLPRVRAAATSAFAAAVALLPLAQGMSLPEGL
DPEQREAWLCDAAFLSQLLDNSKVDDYALPVEILGELRAYQRAGISWMAFLRRCGLHGVL
ADDMGLGKTLQATAIVAACHVEQKRDGLPHKPSLILCPPTLVGHWPHEVTKFVGEELLSV
VQYEGTPPVRCALRERARSADVVVMSYETLRADADWTSAHPWAYAVLDEGHIIRNPKSKI
AQAAKRLVAQHRLILSGTPIQNNVLELWALFDFLMPGFLGSHAAFHGKYGKALAASRGSK
AGSMEAQAGLLAMEGLHKQARIPPASAIIMQYQDDLAPSTCNELYPVMPFILRRTKDAVL
KDLPPKILQDVYVEPSELQRRLYEDFSKSGASRQVASVVSGDISADAGADRAAKAPHPCV
DFAQALQYLRKLCSHPLLVLDASVPQHVAAAAAVANTAPGQWDKSGSALRRLCHAPKLAA
LRELLQVCEQSAAKEEPEAAEGAGHRVLIFAQLKSFLDIVERDVLQPDGVSYLRLDGSVE
AASRFGIVQRFNGDPSIPVMLLTTAVGGLGLNLTSADTVIFLEHDWNPMKDLQAMDRAHR
LGQRRTVNVYRLLTRGTLEERIMGLQRFKLDVANAVVNADNASLAAMDTTQVLDLFSLQG
GGQAPDAGSRQSQTEGDAATAGAVGGGGKGLKAVLEGLGELWDEGQYAEELSLDAFMGKL
KGDDQNPH
NT seq 2907 nt   +upstreamnt  +downstreamnt
atggctgggctgcggcgggggcccgaccctatcctgcgccgctgcacggccgaagcgatg
gccacctttgttttggcgtgcacaaaccggactccctcacccaaccacaggatcataatg
aatttgtgcaagatggcgtgcggcgacccggcggaaacacccagcgcatccgccccggac
cccccggatgagtcatcatcttccgacgggccccccgcctccaccaccgaccatgccaac
ggtggcgaagcccccagccaggaccccaccatggccgctgctgctgtcgctcgacagggc
gctgatgcagccttggaagcattggcgagcaggtttggtgcagacctgctccagaagctg
cctcggctgtgggagcatgcgactgccgccattgccactgacgctgccgctgcaattccc
ggccgcctctccccaccccctgcagaaccccaggctgttattgacactcttcaggtcctc
aaaatactgggccctgcgctggactcacagcttgagccgcagctgacatcgctcatgcca
ggcctcgccgcgtgctgcctgcatgagaggcgggtgctgcatgcagcagcggccgcatgc
gcagagtccctggcatcagtgcagcctacctgcgttctaccttccctcctaaggtttgtg
gtgccgatgctgcaaggctcggcggccgatgcggcgaggtccggagcagtgacagtggtt
ggacgactcatcgccagattaggcctgcagctggtcccctacacgaatctaatagtggtc
cccctcatgggcctcaccagtgactcactgccacgcgtgcgcgcagccgccacgtcagcg
ttcgccgccgccgttgctctcttgcccctggcgcagggaatgtcactgcctgagggcctg
gatccagaacagcgggaggcatggctctgtgacgcggcgttcctgtctcagcttctggac
aactccaaggtggatgactacgcgctgccggtagagattcttggcgagctgcgcgcgtac
cagagggccggcatcagttggatggcgttcctgcgacgctgcggcctgcatggagtcctg
gcagacgacatgggcctcggcaaaacgctgcaggccacagccatcgtcgcagcatgtcat
gtggagcagaaaagggatggcctgccgcacaagccctcgctcatactctgcccgcccaca
cttgtcggccactggccgcacgaagtcactaagttcgtcggggaggagctgctgtcagtg
gtgcagtatgagggaacgccgccggtgaggtgcgcgctgcgagagcgtgccaggtcagcg
gacgtggtggtcatgagttatgagacgctgcgggcggacgctgactggacatccgctcac
ccctgggcctatgctgtgctggacgaaggccacatcatccggaatccaaaatccaagatt
gcacaggcggcaaagcggctggttgcgcagcaccggctcattctctccggcacgcccatc
cagaacaacgtactggagctctgggcactgtttgacttcctgatgccgggcttcctcggg
tctcacgctgcgttccatggcaagtatggaaaagcgctggccgcctcccgggggtccaag
gccggcagtatggaggcgcaggccgggctgctcgccatggagggcctgcacaagcaggcg
cgcattcctcctgcatccgctatcatcatgcaatatcaggatgatttagcaccaagcaca
tgtaatgagctatatcctgtgatgcccttcatcctgcggcgcacaaaggatgctgtgctg
aaggacttgccgcccaagatcctccaggacgtgtatgtggagccgtcagagctgcagagg
aggctgtacgaggacttctcaaagagcggcgcatcgcgacaggtggcgagcgtagtcagc
ggtgacatcagcgctgatgcgggcgctgaccgtgccgccaaggcgccacacccgtgtgtt
gattttgcacaggcgctgcagtacctgcgcaagctgtgcagccacccgctgcttgtgctg
gacgccagcgtgcctcagcacgtggcggcggctgccgcagtcgccaacacagccccgggg
cagtgggacaaatccggcagcgctcttcgacggctctgccacgcccctaaactcgccgct
ctgcgcgagctgctgcaggtgtgtgaacaatcggcagccaaggaagagcccgaggcggcg
gagggcgcgggtcaccgggtgttgatattcgcgcagctgaaatctttccttgacatcgtg
gagagagacgtgctgcagcctgatggagtctcctacctgcgcctggacggcagcgtggag
gccgcgtcccgatttggcatcgtgcagcggttcaacggcgatccctccatccccgtcatg
ctgctcacaacagcggtcggcggcctgggcttaaacttgacttctgccgacacagtcatc
ttcctggagcacgattggaaccccatgaaggacctgcaggccatggaccgcgcgcataga
ctggggcagaggcgcacagtgaatgtgtaccggctgctgacgcgaggcacgctggaggaa
cgcatcatgggactccaacgcttcaaacttgacgtggcaaacgcggtcgtgaacgcagac
aatgcctctctggctgccatggataccacacaggtcttggatcttttctcgctgcagggc
ggcgggcaggctccggatgccggcagccgccaatcgcagacggagggggatgctgccaca
gctggggcagtgggaggcggaggcaaggggcttaaagcggtgttggagggcctgggggag
ttatgggacgaggggcaatatgccgaggagctctcattggatgctttcatgggcaagctg
aagggagacgatcaaaacccgcattag

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