Coccomyxa subellipsoidea: COCSUDRAFT_17103
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Entry
COCSUDRAFT_17103 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00450
Selenocompound metabolism
csl00970
Aminoacyl-tRNA biosynthesis
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
COCSUDRAFT_17103
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_17103
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_17103
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_17103
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
COCSUDRAFT_17103
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
COCSUDRAFT_17103
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COCSUDRAFT_17103
Prokaryotic type
Other AARSs
COCSUDRAFT_17103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
17039767
NCBI-ProteinID:
XP_005646326
JGI:
17103
UniProt:
I0YTR3
LinkDB
All DBs
AA seq
816 aa
AA seq
DB search
MHSRYVCKEASQSDRFWCGVCAGQRNILITSALPYVNNVPHLGNIIGCVLSADCYARYCR
SRGYNCIYVCGTDEYGTATETKALEEGLTCQEICDKYNAIHRDIYQWFDIDFDKFGRTPT
WQQTEIAQGIYSVLEDAKQLVEQESQQLYSEAAGKFLADRFVTGTCPKCAYEDARGDQCD
QCGNLLAAEDLINPKCKLTGTVPVLRPTKHVYLDLPSLTPQLQAYITSSSHAGGWSSNCV
QVTNAWMRDGLKLRCITRDLKWGTPVPRPGYEDKVFYVWFDAPIGYISITANYTHDWKAW
WQNPENVDLVQFMGKDNVPFHTVIFPATLLGTRQPWTLMKSISVTEYLNYEGGKFSKSRG
VGVFGNDAKDTGIPNVHAQVWRYFLLSNRPETSDTDFKWSDLAAKNNSELLANLGNFVNR
SLSFAASRQAPCFLPAYLYDGVIPAGTAEAAQPAIAELNGRVGPLVEQYVAALEKIKLKE
GIRLVMAISAAGNKFFQDTTPWVVVKENKEHCGALINACAGLCVLLAALVEPYMPSITRK
VLEQLKWAPEDARLSDGLISKAGAVHTIVPEGHHMGQPQVLFRTIPKEEEEALRTQFAGS
QADRASGAASTGASAGAAAAGSAQSSASSSKAPGKAKGDKGGGKGKKADARPVDLSLLDL
RVGVIRKAERHPDADSLYVEEVDCGEAEPRTVVSGLAKFIPLEAMQGKRVVLVANLKPAN
MRGVKSQAMVLAATSPDGTRVELVEPPESAAPGERVTADGFEAEPEEQLNPKKKQFEQIQ
PDLLTNADCLACYKGLPLKCKAGPCKVASIVGGGIK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcaggtatgtgtgcaaagaagcgagccaaagtgatcggttctggtgtggtgtc
tgcgcaggccagaggaacattctgatcacgagcgcgctgccgtatgtgaacaacgtgccc
cacctgggaaacatcattggctgcgtgctgagcgcggactgctacgcgcgctactgccga
tcccggggctacaactgcatctacgtctgcggtaccgatgagtacgggaccgccacagag
accaaggcgctggaggaggggctcacatgccaggagatctgcgacaagtacaacgcgatc
caccgggacatctaccagtggtttgacatcgactttgacaagtttggcaggacgcccacg
tggcagcagaccgagattgcacagggcatctacagtgtgctggaggatgcaaaacagctg
gtggagcaggagagccagcagctgtacagcgaggctgccggcaagttcctggccgaccgc
ttcgtgactggaacctgcccgaagtgcgcatacgaggacgcccggggtgaccagtgcgac
cagtgcggcaacctgctggcagcggaggatctcataaaccccaagtgcaagctgacgggg
acggtaccagtcctgcgtcccaccaagcacgtctacctggatctgccctcgctgacacct
cagctgcaggcttacatcacctcctcctcccatgccggcggctggtcctccaactgtgtg
caggtgacgaacgcgtggatgagggatgggctgaagctgcgctgcataacgcgcgacctc
aagtggggtacgccggtgccgcggccgggctacgaggacaaggtgttctacgtctggttc
gacgcccccattggctacatctccatcacagccaactacacccacgactggaaggcgtgg
tggcagaacccggagaatgtggacctggtgcagttcatgggcaaggacaacgttcccttc
cacaccgtcattttcccggccacgctgcttggcacgcgccagccttggacgctcatgaaa
tctatcagcgtcaccgagtacctcaactacgagggcggcaaattctccaagagccgaggg
gttggcgtcttcggcaacgacgccaaggacaccggcatccccaatgtgcatgcacaggtg
tggcggtattttttgctgagcaaccggccggagacgtccgacacggacttcaagtggtcg
gacctggccgccaaaaacaactccgagttgcttgccaacctgggcaattttgtcaaccgc
tccctctcgttcgctgcctccaggcaagcaccttgcttcctcccagcttatttgtacgac
ggtgtcattcctgccggcacagccgaggcggcgcagccggcgattgccgagttgaacgga
agggtgggcccacttgtggagcagtacgtggcagccctggagaagatcaagctcaaggag
ggcatccgcctcgtcatggccatttccgcagccggcaacaagttcttccaggacacgacc
ccatgggtggtggtaaaggagaacaaggagcactgcggagctctgatcaacgcatgcgcc
ggcctttgcgtgctgctggctgccctggtggagccgtacatgccctccatcacacgaaag
gtcctagagcagctgaaatgggcgcccgaggacgcgaggctcagcgatgggctcatttct
aaggcgggcgcagtgcacacgattgtgccggaaggacaccatatggggcagccgcaggtg
ctgttccgcaccatccccaaggaggaggaggaggcgctgcgcacgcaatttgccggcagc
caggccgaccgcgcatcaggggccgcatccactggcgcatcggccggcgctgccgcggcc
ggcagcgcgcagagcagcgctagcagcagcaaagcccctgggaaagcaaagggtgacaag
ggcggcggcaaggggaagaaggcggacgcgcggccggtggacctgtctctgctggacctg
cgagtgggagtcatccggaaggcggagcgccacccggacgcagattcactctacgtggaa
gaggtggactgcggagaggcggagccacgcaccgtggtgagcgggctggcaaagttcatt
cccctggaggccatgcaggggaagagagtggttctggtggccaacctcaagcctgccaac
atgcgcggtgtcaagagccaggccatggttctcgctgccacctcccccgatggcaccagg
gttgagcttgtggagcctccggagagtgcagcgcccggggaaagagtgacagcagatgga
ttcgaagcagagcccgaggagcagctgaaccccaagaagaagcagttcgagcagatacag
cccgacctgctcacaaatgctgactgcctagcctgctataaggggctgcccttaaagtgc
aaggccggcccctgcaaggttgcctctattgttggcgggggcatcaagtag
DBGET
integrated database retrieval system
