Coccomyxa subellipsoidea: COCSUDRAFT_17568
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Entry
COCSUDRAFT_17568 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K24939
CWF19-like protein 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_17568
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
COCSUDRAFT_17568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
HIT
Motif
Other DBs
NCBI-GeneID:
17039571
NCBI-ProteinID:
XP_005646131
JGI:
17568
UniProt:
I0YT68
LinkDB
All DBs
AA seq
578 aa
AA seq
DB search
MSPKKVLLSGSADGKISALFKRVSAVNKSNGPFDMLLCTGRFFPEAGPSEDDSEKDTEIL
DYVSGAKEVPLPTYFIGSFGRGAAHAIESLSSADISAAVHYLGRSGIRQLHGLNVAYLDG
THNAQAFQDDCCHAQGDVRALEQAVDKAEGDVDIFITCEWPADVTAAVPPGSAPADAGST
GSEVVASLATKVRPRYHVCGGKDVFYARPPYLNKDLGAGAHVTRFIGLGSVGNAAKAKSL
HALALVPAAEMDVATLTQRPEGTTPCPYELPSTSKRPLPGADEDLGEQVRPLGLAHPPCA
INDTCKATGETLEACHARSSSNTTPWEQAAERACQLHGSEFMGRELTIDVSTSGARAPSG
KPVEGCWFCLSNPNADVNLVASIGEECYVVLDKGPIVDSHVLVLPVEHYPSQLSLSASSF
AEMERYLSALQSCFASQLFAFERYMTFRKSGGNHCQFNVLPVSAKAAAGARSTVEQLARD
HGVPLQPLDGPSKAGREVLRQAVGDGEYFVALLPDGSRLVHAITRGDKHPLNFGREVAAS
LAGAPDRADWKKCASSPAEEADRTAKFKKLFKPYDIMQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaaagaaagtgcttctgagtggctcagcagatggaaagatctcggctcttttc
aagagggtttctgcagtgaacaaatccaatggccctttcgacatgcttctgtgcactggc
agatttttcccagaggctggaccatccgaagacgacagtgaaaaggacacagaaatactg
gactacgtcagcggtgcaaaagaagtcccactccccacatacttcataggctccttcggg
cggggcgctgctcatgccattgagtccctcagcagcgcagacatatccgctgcagtgcat
taccttgggcgatctgggatcagacagctccatggcctgaatgtggcgtaccttgatggg
acccacaatgcacaagcctttcaggacgattgctgtcatgcgcagggggatgtgagggcg
ttggagcaggctgtggacaaagcagaaggggatgtggacatcttcatcacctgtgaatgg
cctgcagatgtcacagcagctgtgccgccgggctcagcacctgcagatgctggcagcaca
gggtctgaggtggtggccagcctggcgaccaaggtgcggccgaggtaccacgtttgcggc
ggcaaggatgtcttctacgcccgcccgccctacctcaacaaagacctcggcgcgggcgcg
catgtgacacggttcattgggctgggatccgtggggaacgcggccaaggcgaagagcctg
catgcgctggcgctggtgccggctgcggagatggacgtagccacgctgactcagcggccg
gagggcaccacgccctgcccttacgagctgcccagcacctccaagcggcccttgcccggt
gccgacgaggatctgggcgagcaggtccgcccacttggtttggcacaccctccttgtgca
atcaatgacacctgcaaggcaacaggagagacgcttgaagcctgccatgcaagaagcagc
agcaataccacgccctgggaacaggcagcggagcgcgcgtgccagctgcatggcagcgag
ttcatgggccgcgagctcacaattgatgtcagcaccagcggcgcccgcgctcccagcggc
aagcccgtggagggctgctggttctgcctgtccaaccctaacgcagacgtcaacctggtc
gccagcataggagaggagtgctatgtggtgcttgataagggccccattgtggacagccat
gtgctggtgctgcctgtggagcactacccgtcccagctgtccctgtccgcctcatccttt
gcagagatggagcgctacctgtccgccctgcagtcctgcttcgcctcccagctgttcgcg
tttgagcgctacatgacgttcaggaagtcgggcggcaaccattgccagttcaacgtgctg
cccgtttcggccaaggccgccgccggcgcgcgcagcactgtggagcagctcgcgcgcgac
cacggagtgcccctgcagcccctggacggcccctccaaggctggcagggaggtgctgcgg
caggcggtgggggacggtgagtactttgtcgcgctgctgccggacggcagccgcctggtc
cacgccatcacccgcggcgacaagcaccccctcaactttggccgcgaggtggcggcaagc
ctggccggtgcaccagacagggcggactggaagaagtgtgcaagcagcccagcagaggag
gccgaccgcaccgccaaattcaaaaagctcttcaaaccgtatgacatcatgcagtga
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