Coccomyxa subellipsoidea: COCSUDRAFT_17571
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Entry
COCSUDRAFT_17571 CDS
T02914
Name
(RefSeq) erwinia chrysanthemi IndA protein-like protein-like protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00240
Pyrimidine metabolism
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
COCSUDRAFT_17571
Enzymes [BR:
csl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
COCSUDRAFT_17571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
17039522
NCBI-ProteinID:
XP_005646082
JGI:
17571
UniProt:
I0YT19
LinkDB
All DBs
AA seq
313 aa
AA seq
DB search
MISRAAARAAQGIVLSAEVQRALREGTAVVALESTIISHGMPFPQNLETARAVEDVVRGQ
GAVPATIAILDGIPHVGLTDEQLHSLASQAHRVRKTSRRDLPYVMAKRLHGATTVSATML
LAARAGIHIFVTGGIGGVHRGGESTMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEYL
ETQGVGVAAYGADEFPAFFTRRSGCRAPLRIDTPEEGAALIRASLQLDLHSGMVIGVPVP
EAAAAAGERVERATQAALKEAAGRGLAGAEVTPFLLQRIRELTGGASLDANIALIKHNAA
VGSQIAVALASAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatatccagagcagcggcgcgtgctgcgcagggcatagtgctgagcgcggaggtgcag
agggcgttgagggagggaacagcggtggtggcgctggagagcaccatcattagtcacggc
atgcccttcccgcagaacctggaaacggcgcgcgcagtcgaggacgtcgtgcgcggtcag
ggcgccgtcccggcaaccatcgccatcctagacggaattccccacgtcggcctcaccgac
gagcagctgcacagccttgcgtcccaggcgcatagggtgaggaagacatcgcggcgggac
ctgccctacgtcatggccaagcggctgcatggtgcgaccactgtctcggccaccatgctg
ctggctgcacgcgcaggcatccacatcttcgtcaccggaggcatcggcggagtgcacagg
ggcggggagagcacaatggacgtgtcagccgacctgacagagctggggcgcacccccgtc
gcggtcgtgtgcgcaggcgccaaatccatcctcgacattccccgaaccctcgagtacctc
gagacccagggtgtgggagtggcagcctacggcgcggacgaattcccggcattcttcacg
cggcgcagcggctgccgggcgcccctgcgcatagacacgccagaggagggcgccgcactc
atccgcgcatcgctgcagctcgacctgcacagcggcatggtcatcggcgtcccggtgccg
gaggcggcggctgcggcgggggagcgagtggagcgcgcgacgcaggcggcgctgaaggag
gcggccggccgcgggctggccggcgcggaggtaacgccgttcctactgcagcgcatccgc
gagctaacggggggcgcctccctggacgccaacatcgccctcatcaagcacaacgccgca
gtgggatcccagattgccgtcgccctggcctctgctgcctga
DBGET
integrated database retrieval system
