KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_17601
Entry
COCSUDRAFT_17601  CDS       T02914                                 
Name
(RefSeq) DNA-directed RNA polymerase II, 14.5 kDa polypeptide
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03020  RNA polymerase
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCSUDRAFT_17601
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_17601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_17601
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_17601
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     COCSUDRAFT_17601
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCSUDRAFT_17601
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_ribbon_10 Zn_ribbon_IS1595 KDM6_GATAL RUBY_RBDX eIF-5_eIF-2B
Other DBs
NCBI-GeneID: 17039462
NCBI-ProteinID: XP_005646022
JGI: 17601
UniProt: I0YSV9
LinkDB
AA seq 117 aa
MTTGPKLKFCPESNDLLYPKEDRERRKLVYHCRNCGYQEDADPSNYCVYRNEITHTNKER
TVILQDVRSDPTLPRTRDVICPKCAHNEAVFFSASTEEGMTLFFNCCKCGHRWRDYV
NT seq 354 nt   +upstreamnt  +downstreamnt
atgactactgggcctaagctcaagttttgcccggagagcaatgatctcctatatccaaaa
gaagatcgagagcgcaggaagctcgtctaccattgccgcaattgtggctaccaagaagat
gcagatccttcaaactattgcgtgtacaggaacgagataacccacacgaataaggagagg
accgtcatcctgcaggatgtgcggtcagatcccacactccccagaaccagggatgtgatc
tgcccaaagtgtgcccacaacgaggctgtcttcttctctgccagcacagaggaaggcatg
acgctattcttcaattgctgcaagtgcggccatcgatggcgggattatgtctga

DBGET integrated database retrieval system