Coccomyxa subellipsoidea: COCSUDRAFT_17911
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Entry
COCSUDRAFT_17911 CDS
T02914
Name
(RefSeq) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCSUDRAFT_17911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_17911
Enzymes [BR:
csl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
COCSUDRAFT_17911
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCSUDRAFT_17911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
PP-binding
Motif
Other DBs
NCBI-GeneID:
17039274
NCBI-ProteinID:
XP_005645836
JGI:
17911
UniProt:
I0YSC3
LinkDB
All DBs
AA seq
316 aa
AA seq
DB search
MTSPGELLDASWQSLDCPSSELRLEFTLPTGQSFRWRKTGPQEYTGVIQQRVVQMRQEED
DVLFRVLARGDGALPGEDAAALHDYFNLGSRMADLSAHWAERDPRFRNIHPYFPGARVLR
QDPVECLFQFVCSSNNHISRIHGMVERLCRTYGTPLPDLSFYAFPTLENLEEATDEALRA
EGFGYRAKFIVGSVEMLLEKEGGGAAWLQQLRQVPYQEASDALCTLPGVGPKVAACVCLF
SLDKHEAIPVDTHVWQLATRYYTPSLKGKTLTKPLMVAVEAALQERFGRHAGWAHNTLFI
SELASHRHLLPPHLQP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccctggtgagctcttggatgccagctggcagtctctggactgcccatcgtca
gagctgcgcctggagttcaccctccccacaggacagtcgttcaggtggcggaagactggt
cctcaggaatacaccggagtcatccagcagcgcgtggtgcagatgcggcaggaggaagac
gatgtcctgttcagagtgctggcgaggggtgacggggcactaccgggcgaggatgcggcc
gcgctgcatgactatttcaatctgggcagccgcatggctgacctgtctgcgcactgggcc
gagcgtgacccccgcttccgcaacatccacccctacttcccaggtgccagggtgctgagg
caggacccggtggagtgcctgttccagtttgtgtgctcctccaacaaccacatctcgcgc
atccacggcatggtcgagcgcctctgccgcacctatggcacgcccctgcctgacctgtca
ttctatgcgttcccaacgctggagaacctggaagaggccacagatgaggcgctgcgagct
gagggctttggctacagggccaagtttatagtgggcagtgtggagatgctgcttgagaag
gaggggggcggtgcagcctggctgcagcagcttcggcaggtcccctaccaggaagcatca
gacgcgctgtgcacgctgccaggtgtcgggcccaaggtggcagcctgcgtgtgcctgttc
tccctggacaagcatgaggccatcccagtggacacccacgtgtggcagctggcaaccaga
tactacacccccagcctcaaaggcaagacgttgacaaagccgctgatggtggcagtggag
gcagcgctgcaggagcgctttggcaggcatgctggctgggcgcacaacacgctcttcatc
tccgagctggcctcgcaccgccacctgcttccgccacacctgcagccc
DBGET
integrated database retrieval system
