Coccomyxa subellipsoidea: COCSUDRAFT_17914
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Entry
COCSUDRAFT_17914 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_17914
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSUDRAFT_17914
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCSUDRAFT_17914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
17039000
NCBI-ProteinID:
XP_005645562
JGI:
17914
UniProt:
I0YRJ9
LinkDB
All DBs
AA seq
460 aa
AA seq
DB search
MFSLTSAEEPSKPKKKKAKTSAAAATEARKPVSGVSAADVSAWEGLGLGPGVLGAIGGLG
FGEPTPIQRECLLPAIRDRRDVIGAAQTGSGKTLAFGLPILQLKGRKGGGLLRALILAPT
RELAMQVSEHLQAVAKPVGVWVAPIVGGISPPKQARLLGRRPAIVVATPGRLWELMRLGE
PHLADLTGLSFLVLDEADRMVQQGHFQELTCIAHEACPADLLHASFASKETTLMDRMPFR
PKPKIVDLTSERKLADKARSLLTFAAPLSEEERDEVLYYLLAAHPGRTLVFVNAVSTARR
VAALLKLLKMPSSALHAGMQQRARLKALERFRADDTAVLVASDVAARGLDIPGVRCVVHY
QIPASADVYVHRSGRTARAAQDGLAVALVTPREAPRFAALLRVSQDFWGVDCAVHTVILT
SLLTQITGTFGEQDMYIYSAVLQHALVFLVSLHPMWRNMI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgacttctgcagaggagccaagcaagccgaagaagaagaaagcaaaaacc
agcgctgcagcagcgactgaggcacgcaagccggtgtctggggtgtcagcggctgatgtc
agcgcatgggaggggctggggctagggccgggggtgcttggtgcgattggagggctaggg
tttggggagccgacgccgatccagcgcgagtgcctgctgccggccatccgcgaccgccgt
gatgtcatcggcgctgcgcagacgggctccggcaagacactggcttttggcctgcccatc
ctgcagctgaaggggagaaagggtgggggcctgttgagagcgctgatcttggcacccacc
cgcgagctggccatgcaggtgtcagaacatctgcaggcggtggcaaagccagtgggcgtc
tgggtggcgccgattgttggaggcatatcgccgccaaaacaggcgcgcctgctcggccgg
cggcctgccatcgttgtagccacccctgggcggctgtgggagctgatgcggctgggggag
ccccaccttgcagacctgactggactctccttcctagtcctggacgaagccgaccgtatg
gtgcagcaaggccacttccaggagctcacgtgcatcgcacacgaggcatgcccggcggat
ctcctgcatgcatctttcgcttccaaagagactacactgatggaccggatgcccttccgg
cccaagcccaagatcgtggacctgacaagcgagcgcaagctggccgacaaggcacgttcc
ctcctcacatttgctgcgcccctctccgaggaggaacgggacgaggtgctctactatctg
ctagcagcgcaccccggccgcacactggtctttgtcaacgccgtctcaaccgcccgccga
gtcgccgctctgctcaagctcctcaagatgccctcctctgcgctgcacgcaggcatgcag
cagcgcgcgcggctgaaggcgttggagcggttccgcgcggatgacacggctgtcctagtg
gcgagtgacgtggcggcgcgcggcctagacatcccgggggtgcgatgcgtggtgcactac
cagattccggccagcgctgatgtgtacgtgcaccgcagcggccgcacggcgcgcgccgct
caggacggcctggccgtcgcactcgtaactccccgcgaggcgccgcgattcgccgctctt
ctaagggtgagtcaggatttttggggcgtcgattgtgctgtgcacaccgtaatactcact
tccttgctcactcaaattactggcacttttggggagcaggacatgtatatatattctgct
gtcttgcagcatgctcttgtctttctcgtctcactgcaccctatgtggcgaaacatgata
taa
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integrated database retrieval system
