Coccomyxa subellipsoidea: COCSUDRAFT_17970
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Entry
COCSUDRAFT_17970 CDS
T02914
Name
(RefSeq) cysteine proteinase
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_17970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_17970
Spliceosome [BR:
csl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
COCSUDRAFT_17970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-C2H2_OTU1_C
Motif
Other DBs
NCBI-GeneID:
17039127
NCBI-ProteinID:
XP_005645689
JGI:
17970
UniProt:
I0YRX6
LinkDB
All DBs
AA seq
484 aa
AA seq
DB search
MDQTSKQSRREVQPAGDDDSDLDEPVQPLRRASQVRKGHECPYLDTVSRQNLDFDFEKCC
SVSLSPVNVYACLVCGKYFQGRGQQTHAFTHALETGHHMFMKLSDGRVYCLPEGYEVDDR
SLDAIRYVLNPTFTPEKIASLDTDARWVRSLDGSEYMPGLVGLNNMKANDYVNVIVQALL
RVLPLRNFFLLPENYASCKSQLVQRFGELLRKACNPRNFKGQVSPHEFMQAVMTASAKKF
TIEKQSDPVDFLSWFLNMLHADLTGGKRKKASIISRCFQGELEITVEAGTGKAAVPNAAG
EVRDVVERVPFLMLALDLPPAPLYKDALEKNIIPQVPIFELLRKFDGGRIHDDIKAGRRR
YRLTRLPTYLVLHMKRFTKNNFFWEKNPTIVNFPVRNLELRDIVPVPKGKTGEPEASKYD
LVCNILHDGKAGEGTYRAHVHRKAEDAWYEVDDLRVTDILSQMVVLSETYMQVYELKRLP
AKAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacgtccaaacaatctagacgggaagtgcagccagcaggcgatgatgacagc
gatttggacgaacctgtgcagccattacggcgagcctcacaagtgagaaagggccatgag
tgcccttaccttgacacagtatcgagacagaacctggacttcgattttgagaagtgctgc
tcggtgtctctcagtccggtcaatgtgtatgcctgcctggtttgcggcaagtacttccag
ggtcgagggcagcagacgcatgccttcacgcatgcactggagacagggcaccacatgttc
atgaagctgtctgatgggcgcgtgtactgcctgcccgagggatatgaagtggacgatcgc
tcgctggacgccattcgctatgtcctgaaccccacattcacaccagagaagattgctagt
ctggacacagatgcccggtgggtgcgctctctggacggcagcgagtacatgccgggcctg
gtgggcctcaataacatgaaggccaatgactacgtcaacgtcattgtacaggcactgctg
cgtgtgctgccgctgcgcaacttcttccttctgccggagaactatgcgtcctgcaaatct
cagctggtgcaacgttttggggagctgctgcgcaaggcctgcaaccccaggaacttcaag
ggccaggtgagcccgcacgagttcatgcaggcggtgatgacggccagcgccaagaagttc
acaatagagaagcagagcgaccccgtggacttcctctcctggttcctcaacatgctgcac
gccgacctcaccggcggcaagcggaaaaaggcctccatcatctcgcgctgcttccaggga
gagctggagatcacagtggaggcgggtacggggaaggcagcggtgccaaatgcggcgggg
gaggtgagggatgtggtggagcgcgttcccttcctcatgctcgcactcgatctgccgcct
gcgcccctctacaaggacgcccttgaaaagaacatcatccctcaggtgcccatctttgag
ctgctgcgaaagtttgacggcgggcgcatacacgatgacataaaggccgggaggaggcgg
taccggctgacgcggctgcctacctacctggtgctgcacatgaagcgcttcaccaagaac
aacttcttctgggagaagaaccccaccatcgtcaacttcccagtcagaaatctggagctt
cgagacattgtcccagtccccaaaggaaagactggggagccagaggcatccaaatacgac
ctggtgtgcaacatcttgcacgatgggaaggcaggcgaggggacatacagagcgcacgta
caccgcaaggcagaggacgcttggtatgaggtggatgatctgcgcgtcaccgacatcctg
tcccagatggtggtcctgtcagaaacatacatgcaggtgtatgagctcaagcggctgcct
gccaaagcagcctga
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integrated database retrieval system
