KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_17970
Entry
COCSUDRAFT_17970  CDS       T02914                                 
Name
(RefSeq) cysteine proteinase
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_17970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_17970
Spliceosome [BR:csl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    COCSUDRAFT_17970
SSDB
Motif
Pfam: UCH zf-UBP
Other DBs
NCBI-GeneID: 17039127
NCBI-ProteinID: XP_005645689
JGI: 17970
UniProt: I0YRX6
LinkDB
AA seq 484 aa
MDQTSKQSRREVQPAGDDDSDLDEPVQPLRRASQVRKGHECPYLDTVSRQNLDFDFEKCC
SVSLSPVNVYACLVCGKYFQGRGQQTHAFTHALETGHHMFMKLSDGRVYCLPEGYEVDDR
SLDAIRYVLNPTFTPEKIASLDTDARWVRSLDGSEYMPGLVGLNNMKANDYVNVIVQALL
RVLPLRNFFLLPENYASCKSQLVQRFGELLRKACNPRNFKGQVSPHEFMQAVMTASAKKF
TIEKQSDPVDFLSWFLNMLHADLTGGKRKKASIISRCFQGELEITVEAGTGKAAVPNAAG
EVRDVVERVPFLMLALDLPPAPLYKDALEKNIIPQVPIFELLRKFDGGRIHDDIKAGRRR
YRLTRLPTYLVLHMKRFTKNNFFWEKNPTIVNFPVRNLELRDIVPVPKGKTGEPEASKYD
LVCNILHDGKAGEGTYRAHVHRKAEDAWYEVDDLRVTDILSQMVVLSETYMQVYELKRLP
AKAA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggatcagacgtccaaacaatctagacgggaagtgcagccagcaggcgatgatgacagc
gatttggacgaacctgtgcagccattacggcgagcctcacaagtgagaaagggccatgag
tgcccttaccttgacacagtatcgagacagaacctggacttcgattttgagaagtgctgc
tcggtgtctctcagtccggtcaatgtgtatgcctgcctggtttgcggcaagtacttccag
ggtcgagggcagcagacgcatgccttcacgcatgcactggagacagggcaccacatgttc
atgaagctgtctgatgggcgcgtgtactgcctgcccgagggatatgaagtggacgatcgc
tcgctggacgccattcgctatgtcctgaaccccacattcacaccagagaagattgctagt
ctggacacagatgcccggtgggtgcgctctctggacggcagcgagtacatgccgggcctg
gtgggcctcaataacatgaaggccaatgactacgtcaacgtcattgtacaggcactgctg
cgtgtgctgccgctgcgcaacttcttccttctgccggagaactatgcgtcctgcaaatct
cagctggtgcaacgttttggggagctgctgcgcaaggcctgcaaccccaggaacttcaag
ggccaggtgagcccgcacgagttcatgcaggcggtgatgacggccagcgccaagaagttc
acaatagagaagcagagcgaccccgtggacttcctctcctggttcctcaacatgctgcac
gccgacctcaccggcggcaagcggaaaaaggcctccatcatctcgcgctgcttccaggga
gagctggagatcacagtggaggcgggtacggggaaggcagcggtgccaaatgcggcgggg
gaggtgagggatgtggtggagcgcgttcccttcctcatgctcgcactcgatctgccgcct
gcgcccctctacaaggacgcccttgaaaagaacatcatccctcaggtgcccatctttgag
ctgctgcgaaagtttgacggcgggcgcatacacgatgacataaaggccgggaggaggcgg
taccggctgacgcggctgcctacctacctggtgctgcacatgaagcgcttcaccaagaac
aacttcttctgggagaagaaccccaccatcgtcaacttcccagtcagaaatctggagctt
cgagacattgtcccagtccccaaaggaaagactggggagccagaggcatccaaatacgac
ctggtgtgcaacatcttgcacgatgggaaggcaggcgaggggacatacagagcgcacgta
caccgcaaggcagaggacgcttggtatgaggtggatgatctgcgcgtcaccgacatcctg
tcccagatggtggtcctgtcagaaacatacatgcaggtgtatgagctcaagcggctgcct
gccaaagcagcctga

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