Coccomyxa subellipsoidea: COCSUDRAFT_18052
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Entry
COCSUDRAFT_18052 CDS
T02914
Name
(RefSeq) cyclin-like protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_18052
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
COCSUDRAFT_18052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
17038909
NCBI-ProteinID:
XP_005645474
JGI:
18052
UniProt:
I0YRB1
LinkDB
All DBs
AA seq
496 aa
AA seq
DB search
MAYCGHCKQEVEVENDDANGYQCCTTCGAVLDEGGFSTEVTFTKGAGGVSTADGQFLSDA
AASRGLARISGGRGYGYQLDSHEKSLNKGRSEVTQLVDRLRIAPRDDTVEAASRLYKLAL
SRNFTRGRRTQLVAAACLYIVCRQDSKPFMLIDFSDALQVNVFTLGAVFLHLCKLLRLEE
HPMFQRPVDPSLYLHRFANRLCVNDKFHAVTNTALRLVASMKRDWMQTGRRPSGICGAAL
FIAAHIHGVEKSKRDVVNIVHVGEATLAKRVKEFALTTSGDLTIEEFEDEGRALEAQHRK
ELQLNTIGAPAPAHTKGGCQHLTAGAAQHFAHGMCKVCYEEFLEVTGGTSAGADPPAFTA
GLAPKKVALMHCPAELDGAAGGVPAAPAADVADDVADEELSELEDDEASLYLHTPEEAKL
KELIWTELNREFLDCQSAKAAALESAAAKARPEDMLEPAETPEEATRRMLDAKKLSSKIN
YNALANLFSETSRGEQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactgtggtcactgcaagcaagaggtggaagtcgaaaatgatgacgcgaatggg
taccagtgttgcacaacttgtggtgctgtgctggacgagggtggcttctctaccgaagtc
accttcacgaagggtgctggaggcgtcagcactgcagacgggcagttcctctccgatgca
gcagcctctcgtggcttggccaggatttctggtggccgaggttatgggtatcagctggac
tcgcacgaaaagtcgctgaacaaggggaggagcgaggtgactcagctggtggatcggctg
cgcattgcccctcgggacgacactgtggaggccgcctcgcgcctctacaagctggccctc
agccgcaacttcacccgcggtcggcggacacaactggtggcggcggcgtgcctgtacata
gtgtgccgccaggactccaagcctttcatgctgatcgacttctcagacgcgctccaggtc
aatgtgttcaccctgggcgccgtcttcctgcacctctgcaagctgctccgccttgaggag
caccccatgttccagcggccagtggaccccagcctgtacctgcaccgttttgccaacagg
ctgtgcgtgaacgacaagttccatgcggtgaccaacacagcgctgcggctggtggccagc
atgaagcgcgactggatgcagaccggccgacggccctccggcatctgtggcgccgccctc
ttcattgcagcccacatccacggcgtggagaagagcaagagggacgtggtgaacatagtg
cacgtgggcgaggcgactctggcgaagcgcgtgaaggagtttgcgctgaccacgagcggc
gacctgaccatagaggagtttgaggacgagggccgagccctggaggcccagcacaggaag
gagctgcagctcaacaccatcggcgcccccgcccccgcacacaccaagggcggctgccaa
cacctcactgccggagcggcgcagcactttgcgcacggcatgtgcaaggtgtgctacgag
gaattcttggaggtcacgggggggactagcgccggcgccgacccgcccgccttcacggcc
ggcctcgcccccaagaaggtagctctcatgcactgccccgcagagctcgacggggcggcc
gggggcgttcctgccgcgccggcggctgacgtggcggatgacgtggcggacgaggagctg
tcggagctggaggatgacgaggcgtcgctgtacctgcacacgccggaggaggccaaactc
aaggaactcatctggaccgagctcaaccgggagttcctcgattgccaatccgccaaagcc
gccgccctcgaatccgccgccgccaaggcgcgtccagaagacatgttggagcctgcagag
actccggaggaggccacgcggcggatgctggacgccaagaagctgtcctccaagatcaac
tacaacgcgctcgccaatctcttcagcgaaacctcccgtggcgagcagtga
DBGET
integrated database retrieval system