Coccomyxa subellipsoidea: COCSUDRAFT_18358
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Entry
COCSUDRAFT_18358 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCSUDRAFT_18358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_18358
Enzymes [BR:
csl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
COCSUDRAFT_18358
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COCSUDRAFT_18358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
17038798
NCBI-ProteinID:
XP_005645363
JGI:
18358
UniProt:
I0YR00
LinkDB
All DBs
AA seq
246 aa
AA seq
DB search
IGQLINSEDADILCLQETKLKDSDVAACEKLLRPGLQDWHFYFNNSIAKKGYSGVAVLSR
AKPLSVTNGLGKEDHDQEGRVITAEYPSFYVVNVYVPNSGEGLKRLEYRVGSWDVAFADY
LAGLGAKKPVILTGDLNCAHQEIDIHDPKRNLKSAGFTEEERKSFSAQLLQRGFKDTFRE
KYPDVVGYTYWNYRTGARVRNRGWRLDYFLVSEALAERVHDIFHLPDVQGSDHCPVGLVL
HRVGET
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
attggccaactgatcaattcggaggatgcagacatcctctgcctacaggagacaaaattg
aaggacagcgatgttgcagcatgtgagaagcttctccggcctggcctccaggattggcat
ttctacttcaacaactccatcgcgaagaagggctactctggagttgcagtgctgtcaagg
gcgaagcccctgagcgtcacaaatggtttgggaaaggaagatcatgaccaggagggccgc
gtcatcactgcagagtacccatcattctacgttgtcaatgtgtacgtgcccaactctgga
gagggcctgaagaggttggagtacagggttggctcctgggacgttgccttcgctgactac
ctggccggcttgggagcaaagaagccggtcatcctcactggggacctaaactgcgctcac
caggagattgacatacacgacccgaaaaggaatctgaaatctgcagggttcacagaggaa
gagaggaagtccttcagcgcgcagctgctgcagagaggcttcaaggacaccttcagagaa
aagtaccctgatgtggttggctacacatactggaactaccggactggagcccgagtaaga
aatcggggttggcgcttggattactttctggtgtctgaggcactggcagagagggtgcat
gacatattccacctgccagatgtgcaaggctcggatcactgccccgttggccttgtcctg
catcgtgttggggagacctga
DBGET
integrated database retrieval system