Coccomyxa subellipsoidea: COCSUDRAFT_18384
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Entry
COCSUDRAFT_18384 CDS
T02914
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_18384
Enzymes [BR:
csl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCSUDRAFT_18384
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCSUDRAFT_18384
Prokaryotic type
COCSUDRAFT_18384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
17038629
NCBI-ProteinID:
XP_005645194
JGI:
18384
UniProt:
I0YQI1
LinkDB
All DBs
AA seq
235 aa
AA seq
DB search
MVLKGSSFAAGVWANAAVLVDKPQDWTSFDVCGKLRGALKVKKVGHAGTLDPMATGLLII
CTGQGTKQIDDFVAMEKAYSGTLRLGQATPSYDAMSEIEEELPWEDITDEDLEAAKEAFV
GDILQQPPMFSAIKIKGERLYKAARRGEVVERQSRPVTIHSFELQRDESNRQDVHFKVTC
SKGTYIRSLAHDLGKAVGSAAHLTALRRESIGEHSVADAWSVLDLVAAAQAARQS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaagggctcttcctttgctgcgggtgtatgggcaaacgctgccgtcctagtg
gataaaccccaggactggacctccttcgatgtctgcggcaagcttagaggcgccctcaaa
gtaaagaaggtagggcatgcggggacccttgaccccatggcgacggggttgctaatcatc
tgcacgggccaggggacgaagcaaatagacgattttgtggcgatggagaaggcctattct
ggcacgctgcgactggggcaggcaacgccatcatacgacgccatgtctgagatcgaggag
gaacttccctgggaggacatcacagatgaggatttggaggcggccaaggaggcctttgtt
ggggacatcctacagcagccacccatgttctcagccatcaagatcaagggggagaggctg
tacaaggcagccaggaggggagaagttgtagagaggcagtcacggccggtgacaatacac
agctttgagctgcagcgggacgagagcaacagacaagatgtgcacttcaaagtaacctgc
agcaaaggcacctacatccgctcactagcccatgacctgggcaaagcagtgggcagtgca
gcgcatctgactgccctgagaagggagagcataggggagcacagtgtggcagatgcatgg
agcgtgctagatctggtggctgctgcacaggccgctcggcaaagttag
DBGET
integrated database retrieval system
