KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_18532
Entry
COCSUDRAFT_18532  CDS       T02914                                 
Name
(RefSeq) gcip-interacting family protein-like protein
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_18532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_18532
Spliceosome [BR:csl03041]
 Complex B
  Other components
   Prp19-related factors
    COCSUDRAFT_18532
 Complex C
    COCSUDRAFT_18532
SSDB
Motif
Pfam: SYF2
Other DBs
NCBI-GeneID: 17038364
NCBI-ProteinID: XP_005644932
JGI: 18532
UniProt: I0YPR9
LinkDB
AA seq 217 aa
MGPRQKKLWELQQKLRASRKANQDAMVAEKRRQASSGAEEAGEKRKWFEEKKARREADLK
RMNLDEKKAFMLETADAAEAQYKKKQKKPAPQGVASFNAKTLYEAYERRTANVSMSVEEY
EHMKATAPEFYRAADSMLYGVAPEVGEDKIDAMVAELDARKTKRAEYSRRRAFQPDKDVD
FINDRNAHFNRKIARAFDAHTQEIKANLERGTALPEH
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggtccgcggcagaagaagctgtgggagctgcagcagaagctgcgcgccagccgcaag
gccaaccaggatgccatggtcgcagagaagcggcggcaggcaagttctggtgcggaggag
gccggcgagaagcgcaaatggtttgaggagaagaaggcgcgccgcgaggccgacctcaag
cgcatgaatctcgacgagaaaaaggcgttcatgctggaaacggcggacgcggcggaggcg
cagtacaagaagaagcagaagaagccggcgccgcagggcgttgcctctttcaacgcgaag
acactctatgaggcctacgagcgccgcactgccaacgtgtcaatgtctgtcgaggagtac
gagcacatgaaggcgaccgcgccggagttctaccgcgcagccgacagcatgctctatggg
gtggcgccggaggttggcgaggacaagatcgacgcgatggttgctgagctggacgcgcgc
aagaccaagcgcgccgagtacagccgccggagggcgttccagccggacaaggacgtcgac
ttcatcaacgaccgaaacgcgcacttcaaccgcaagatcgcccgcgccttcgacgcccac
acgcaggagatcaaggccaacctcgagcgcggcacagccctgccagagcactag

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