KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_18977
Entry
COCSUDRAFT_18977  CDS       T02914                                 
Name
(RefSeq) Prp18-domain-containing protein
  KO
K12817  pre-mRNA-splicing factor 18
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_18977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_18977
Spliceosome [BR:csl03041]
 Complex C
  Other components
   Step II factors
    COCSUDRAFT_18977
SSDB
Motif
Pfam: Prp18 RhopH3_C
Other DBs
NCBI-GeneID: 17038271
NCBI-ProteinID: XP_005644839
JGI: 18977
UniProt: I0YPH6
LinkDB
AA seq 189 aa
MFPNGCRYFKQWCKEWGEDLDRRPEAVKKTGGGNQATIQYQQTMTFIKPLYKQLKQKLVH
PEMVAGLYMIVQAIKQRNYLHAYDVYMRLAIGNNPWPIGVTSVGIHERSAREKISHVMNG
GAHIMNDEATRKYLQAVKRLLTFVQRAYPTDPSRSIDFDGFRDAGRGAAGSGSDKQVPLH
SSLCSCPGL
NT seq 570 nt   +upstreamnt  +downstreamnt
atgtttcctaatggctgcaggtacttcaagcaatggtgcaaggaatggggcgaagatttg
gatcggcggccagaggcggtgaaaaagactggcggaggcaaccaggcgacaatacagtac
cagcagacaatgactttcatcaagccgctgtataagcagctgaagcagaagctggtgcat
cctgagatggttgccgggctgtacatgatcgtgcaggctatcaagcagcgcaactacctg
cacgcctacgatgtgtacatgcgcctcgccatcgggaacaacccctggcccattggggtg
acgagcgtgggcatccacgagcggtcggcgcgcgaaaagatttcccacgtcatgaacggc
ggcgcgcacatcatgaacgacgaggccacgcgcaagtacctgcaggccgtcaagcgcctg
cttacctttgtgcagcgcgcgtacccgaccgacccctcccgctccatcgactttgacggg
ttccgagacgccggccgcggcgccgccggctccggcagtgacaaacaggtgcccctgcat
tcctctttgtgcagctgccctggtttgtaa

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