Coccomyxa subellipsoidea: COCSUDRAFT_19010
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Entry
COCSUDRAFT_19010 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03030
DNA replication
csl03420
Nucleotide excision repair
csl03430
Mismatch repair
csl03440
Homologous recombination
csl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSUDRAFT_19010
03420 Nucleotide excision repair
COCSUDRAFT_19010
03430 Mismatch repair
COCSUDRAFT_19010
03440 Homologous recombination
COCSUDRAFT_19010
03460 Fanconi anemia pathway
COCSUDRAFT_19010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csl03000
]
COCSUDRAFT_19010
03032 DNA replication proteins [BR:
csl03032
]
COCSUDRAFT_19010
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_19010
Transcription factors [BR:
csl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
COCSUDRAFT_19010
DNA replication proteins [BR:
csl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
COCSUDRAFT_19010
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
COCSUDRAFT_19010
MMR (mismatch excision repair)
COCSUDRAFT_19010
DSBR (double strand breaks repair)
HR (homologous recombination)
COCSUDRAFT_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
DUF223
tRNA_anti-codon
GCV_T
Motif
Other DBs
NCBI-GeneID:
17037982
NCBI-ProteinID:
XP_005644552
JGI:
19010
UniProt:
I0YNN9
LinkDB
All DBs
AA seq
476 aa
AA seq
DB search
MASRSSGPGVTLEDWHSCRVRASGGGASRVACQPIHALNPYSNDWTIRAKLVSKAPLRHF
DKAGQQQAVFGVEVVDDQGTTIEITLWRGLAEKFYDHLEEGRVYIFRRGQVKLANKNYKT
VRNDYTIHMDNGSEIEQCEDSDVSKMTAKLKFVDFERLPMYAGKKTLVDVLGIATAVGPL
GSVKRSRDGTELARRDVTLVDQGAKTVVVTLWGSTAEEVGAQLEQQPDALISISSCRVTD
FNGVSLSTVTRSGVSVEPEGERADALRRWWESDGRTAPTQHLGEGLASAKRASGGAAELQ
TFAQLRVGKEELPPADAKPQYHTVIATVANIDSQQSLYYEACPDNNRKVVKQGEGWFCEY
DQQTYMAMVRRYVMLANCVDASGDCLLSVFNEQAEALLGISADEIATLKEDETNPGPYEA
VLKRAQWSEWVLRVQSRTQEYNGELRQRLSVASLKPVSYVEESRRMVQALDRLRAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaggagttctggacctggagtgacgttggaggactggcattcatgcagggtg
cgggcgtctggcgggggcgcgtctagggtggcgtgccagcccatccacgcgctcaacccg
tacagcaacgactggaccatccgcgcaaagctggtctccaaggcgcccctgcgccacttc
gacaaggccggccagcagcaggccgtcttcggtgtcgaggtcgtcgacgaccaggggacg
acaatagagataacgctgtggcggggcctggcggagaagttctacgaccacctggaggag
gggcgcgtttatatcttccgccgcggccaagtcaagctggccaacaagaactacaagacc
gtgcgcaacgactacaccatccacatggacaacgggtcggagatcgagcagtgcgaggac
agcgacgtgtccaaaatgacggccaagctcaagtttgtggattttgagcgcctgcccatg
tacgccggcaagaagaccctcgtggatgttctgggcatcgcgaccgccgtcggcccgctc
ggcagcgtcaagcgcagccgcgacggcaccgaactggcccgccgcgacgtcaccctcgtg
gaccagggggcgaagacggtggtggtgacgctgtgggggagcacggcggaggaagttggc
gcgcagctggagcagcagccggacgcactcatctccatcagctcctgccgggtcaccgac
ttcaatggggtgtcgctgtcgacggtgacgcggagtggggtgagcgtggagccggagggc
gagcgtgctgacgcgctgcggcgctggtgggagtcagacggccgcaccgcgcccacgcag
cacctcggagagggcctcgcctccgccaagcgcgcgtcaggcggcgctgcggagctgcag
acgtttgcgcagctgcgggtggggaaggaggagctgccacccgcggacgccaagccacag
taccacacagtcatcgcgaccgtggccaacatcgactcccagcaatccctctactacgag
gcctgccccgacaacaaccgcaaggtggtgaagcagggagaggggtggttctgcgagtac
gaccagcagacctacatggccatggtgcggcgctacgtgatgctggccaattgcgtggac
gcctcaggggactgcctcctctccgtcttcaacgaacaggctgaggcgttgctgggcata
agtgcggatgaaatagcgacactcaaagaggacgagaccaacccgggcccctacgaggca
gtcctaaagcgcgcccagtggtccgaatgggtcctgcgagtgcagtcccgcacccaggag
tacaatggggagctgcggcagaggctgagcgtggcctcgctcaagccggtcagctacgtg
gaggagagccgccgcatggtccaagcccttgaccgcctcagggccgcctga
DBGET
integrated database retrieval system
