Coccomyxa subellipsoidea: COCSUDRAFT_19074
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Entry
COCSUDRAFT_19074 CDS
T02914
Name
(RefSeq) DEAD-domain-containing protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_19074
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSUDRAFT_19074
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
Helicases
COCSUDRAFT_19074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
17037842
NCBI-ProteinID:
XP_005644412
JGI:
19074
UniProt:
I0YN99
LinkDB
All DBs
AA seq
508 aa
AA seq
DB search
MSQDGLEDTTGITLFAKQTKKRRRKEKETGDAAQKPPPETENDSKSVEQNTAALGAETAA
NDEATERQEPASTSGQEAPVTFRSLGISEWLDRVCKSLGMVRPTQVQRGCIPAILGGRDV
LGTAHTGSGKTAAFALPILQRLAREPYGIFALVLTPTRELAMQLADQFRALGSGMSLTDA
VVIGGLDMQSQAKALAQRPHIIVATPGRLRDLLSAHADLAEGFNRVAFLVLDEADRLLEP
TFESELRVIASHLPAQRQTLLFSATLTRSLATLQASALRDAFLFQADAYEGLETAVNLRE
DYLFIPAKVRELYLVHVLESLEEFSIRSAIVFCSTCRGCHLLSLLLAELGVASVALHSHL
TQGRRLAALHRFKSGGVPILLATDVASRGLDIPTVDLVVNYELPSLPRDYVHRVGRTARA
GRGGWALSLVTQYDVELVQHIESLIGHQLREFTLDEAQVLKGITRVYSAKRSVAVKALED
ESRDDKHRQLIRRKSGPKKAKKVKGGTD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacggcttggaagacacgacagggatcaccctgttcgcgaagcagacgaaa
aagcggcgcagaaaggagaaagaaacaggcgacgctgcccaaaagccacctcctgaaaca
gaaaacgacagcaaaagtgtcgagcagaacaccgctgcccttggtgcagagacagccgca
aatgatgaggctactgagaggcaggagccagcgagcaccagcggccaggaggcccctgtg
accttcaggagcctgggtatctcagagtggcttgacagggtctgcaaatcgctgggaatg
gtgcggccgacgcaggtgcagcgcggctgcatcccggccatcctcggcggccgggacgtt
cttggaacggcgcacaccggcagcggaaaaaccgccgcttttgcgctgcccatattacag
cgactcgcgcgagaaccttatggcatcttcgcccttgtgctcacgccaaccagggagttg
gcgatgcagctggcggaccagttcagggcactcggctccggcatgtccctcacggatgcg
gtggtgattggtgggctggacatgcagagccaggcgaaggctctggcgcagcggccgcac
atcattgtcgccacccctggacggctgagggatctgctgagcgcgcatgctgacctggcg
gagggcttcaatcgcgtggcgttcctggtcctggacgaggcggaccgcctgctcgaaccc
accttcgaatccgagctgcgagtcatcgcgagtcacctgccagctcagcgccagacgctg
cttttctccgccaccctcacccggagcctcgccaccctgcaggcatcagccctgcgcgac
gcctttttgttccaggcagatgcatatgaggggctggaaacagcagtgaacctgcgagag
gactacctcttcatccctgccaaggtgcgggagctgtacctggtgcacgtgctggagtcc
ttggaggagttctctatccgcagcgcgatagttttctgctctacctgccgcggctgccat
ctgctttctctgctgctggcagagctgggcgtcgcctctgtagcgctgcattctcacctc
acgcaagggcgccgcttggctgcattacataggttcaagtcggggggcgtgcccattctg
ctggcgacggacgtggcgagccggggcctggacattcccacagtggacctcgttgtgaat
tatgagctgccctctctgccgcgcgattacgtgcaccgcgtcggccgaaccgcgcgcgcc
ggccgcggcggctgggcgctaagcctcgtcacgcagtatgacgtggagttggtgcagcac
atagagagcttgatcgggcaccagctgcgagagttcactctggacgaggcccaggtgctc
aaggggatcacaagggtgtattcggcaaagcgctcggtggcagtgaaagctctggaggat
gagtcacgcgatgacaaacaccgccagctcatcaggcgcaagagcggtcccaagaaagcc
aagaaagtgaagggaggcactgattag
DBGET
integrated database retrieval system
