Coccomyxa subellipsoidea: COCSUDRAFT_19088
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Entry
COCSUDRAFT_19088 CDS
T02914
Name
(RefSeq) ARM repeat-containing protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
csl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_19088
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
COCSUDRAFT_19088
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_19088
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_19088
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_19088
Protein phosphatases and associated proteins [BR:
csl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
COCSUDRAFT_19088
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
COCSUDRAFT_19088
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
COCSUDRAFT_19088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
Adaptin_N
Cnd1
TOR1L1_N
GNC1_N
CLASP_N
Arm
INTS7_N
Motif
Other DBs
NCBI-GeneID:
17037989
NCBI-ProteinID:
XP_005644559
JGI:
19088
UniProt:
I0YNP6
LinkDB
All DBs
AA seq
589 aa
AA seq
DB search
MEDSKSDDGLYPIAVLIDELKNEDVALRLNSVRRLSTIALALGEERTRRELIPFVSESND
DEDEVLLALAEELGRFIPYVGGPEYGHVLLSPLENLCTVEETVVRDKAVQSLAAIASELP
TKSVSEYFVPLVKRLAGGEWFTSRISCCGLLPVAHRVSTQESELQELRGLYRVLSQDDTP
MVRRAAAQNLSGMAETVEQQVLSQDICPIFIKLTQDDQDSVRLLAVQCCGPLARSLSKSE
CLSSVVPVVQRFAQDKSWRVRYNVAQQLHMLCAALGAEASRNEIVPPFLKLLRDSEAEVR
VAAAGKVAAISNLLDADTVIRVVLPCVKVLAADSSQYVRSALAAVVMEMAAALGKSATIE
HLLPVFLSLLKDDVPDVRLNIISKLDQVNQVIGIDLLGESLMPAIENLADDNHWRVRLAI
IKYIPLLATQLGADVFQQQLGQQCMRWLEDQVFCIREAATLNLQKLAAEFGPEWAKEHLV
PQVLAMVNNSHYLYRMTILSAVAALAPAVSHDVLCNNMLPVVISCAKDKVPNIKFTVAKM
LERLVPLVDAAIAEHTIKPCLLELADDSDADVQFFAQHALQSCEIVTAA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcaaaaagcgacgatggcctgtaccccatcgctgttctgatagatgagctc
aagaatgaggacgtggcattgaggctgaactctgtgcgccggttaagcacaatagccttg
gctttgggagaagaaagaacacgccgagagctcattccttttgtgagcgaaagcaacgat
gacgaagacgaagttctcttggcattggcagaggagttgggtcgtttcatcccctacgtg
gggggaccagaatatggccatgttctcttgagcccgctggaaaacctgtgcaccgtagag
gagacagtggtgcgcgacaaggcagtacagtcattggctgcgatagcctcagaactgccg
acaaagagcgtctcagaatactttgtgccccttgtcaagaggctcgctggaggcgagtgg
ttcacttccaggatttcgtgctgtggcctgctgccagtggcccaccgtgtttcaacacaa
gaaagcgagctccaggagctcaggggcttataccgtgttttgtcacaagacgacacgccc
atggtccggcgtgctgccgctcagaacctcagcggaatggcagagactgtagagcagcag
gttttgagccaagatatctgccccatcttcatcaagctcacacaggacgatcaagactcg
gttcgcttgctggctgtgcaatgctgcggccctttggcacgctcgctaagcaagagcgag
tgcctctcctctgtcgtcccggttgtgcagcggtttgcccaggacaagtcctggcgcgta
cggtacaatgtggcgcaacaattgcacatgctctgtgctgcgctgggcgcggaggcttcc
aggaatgagatagtacccccttttctgaagcttctgcgggatagcgaagcagaagtgagg
gttgccgctgccggcaaggttgcggcgatcagcaacctgctggatgcagacacggtgatc
agggtggtcctgccctgtgtgaaagtgctcgcagctgatagcagtcagtacgtgcggagt
gctcttgctgctgttgtcatggagatggccgcggccctcggcaaatcagccaccattgag
catttgctacctgtcttcctaagccttttaaaggacgatgtcccagatgtgcgactgaat
atcatttccaagcttgatcaggtaaatcaggtgattggaatcgatcttctaggggagagc
ttgatgcccgccatcgaaaatttggcagatgacaaccactggcgggtccgattggctatc
atcaagtacatacccctgctggcaacgcagctaggtgctgatgtattccaacagcaactt
gggcagcagtgcatgaggtggcttgaggatcaggtgttctgcatacgcgaggcagcgaca
ctgaatctgcagaaattggcagcggagtttggtcctgagtgggctaaagagcatcttgtt
cctcaggtcctagccatggtgaacaattcccactacctgtaccgcatgacaatcctctca
gctgttgcagctcttgcacctgctgtcagtcatgacgtcctgtgcaacaatatgctgcca
gtcgtcatatcttgcgcaaaagacaaggttccaaacatcaagttcactgtggcaaagatg
ctggaacgtcttgttcctctggtggatgctgctatcgctgagcacacaatcaagccctgc
ctgctggagcttgctgatgacagcgatgcagacgtgcaattttttgctcagcatgcgctg
cagtcctgcgaaattgttactgctgcgtaa
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