KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_19088
Entry
COCSUDRAFT_19088  CDS       T02914                                 
Name
(RefSeq) ARM repeat-containing protein
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03015  mRNA surveillance pathway
csl04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    COCSUDRAFT_19088
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    COCSUDRAFT_19088
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csl01009]
    COCSUDRAFT_19088
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_19088
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_19088
Protein phosphatases and associated proteins [BR:csl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     COCSUDRAFT_19088
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     COCSUDRAFT_19088
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     COCSUDRAFT_19088
SSDB
Motif
Pfam: HEAT PPP2R1A-like_HEAT HEAT_2 HEAT_EZ Vac14_Fab1_bd HEAT_EF3_N PDS5 Adaptin_N Cnd1 TOR1L1_N GNC1_N CLASP_N Arm INTS7_N
Other DBs
NCBI-GeneID: 17037989
NCBI-ProteinID: XP_005644559
JGI: 19088
UniProt: I0YNP6
LinkDB
AA seq 589 aa
MEDSKSDDGLYPIAVLIDELKNEDVALRLNSVRRLSTIALALGEERTRRELIPFVSESND
DEDEVLLALAEELGRFIPYVGGPEYGHVLLSPLENLCTVEETVVRDKAVQSLAAIASELP
TKSVSEYFVPLVKRLAGGEWFTSRISCCGLLPVAHRVSTQESELQELRGLYRVLSQDDTP
MVRRAAAQNLSGMAETVEQQVLSQDICPIFIKLTQDDQDSVRLLAVQCCGPLARSLSKSE
CLSSVVPVVQRFAQDKSWRVRYNVAQQLHMLCAALGAEASRNEIVPPFLKLLRDSEAEVR
VAAAGKVAAISNLLDADTVIRVVLPCVKVLAADSSQYVRSALAAVVMEMAAALGKSATIE
HLLPVFLSLLKDDVPDVRLNIISKLDQVNQVIGIDLLGESLMPAIENLADDNHWRVRLAI
IKYIPLLATQLGADVFQQQLGQQCMRWLEDQVFCIREAATLNLQKLAAEFGPEWAKEHLV
PQVLAMVNNSHYLYRMTILSAVAALAPAVSHDVLCNNMLPVVISCAKDKVPNIKFTVAKM
LERLVPLVDAAIAEHTIKPCLLELADDSDADVQFFAQHALQSCEIVTAA
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggaggattcaaaaagcgacgatggcctgtaccccatcgctgttctgatagatgagctc
aagaatgaggacgtggcattgaggctgaactctgtgcgccggttaagcacaatagccttg
gctttgggagaagaaagaacacgccgagagctcattccttttgtgagcgaaagcaacgat
gacgaagacgaagttctcttggcattggcagaggagttgggtcgtttcatcccctacgtg
gggggaccagaatatggccatgttctcttgagcccgctggaaaacctgtgcaccgtagag
gagacagtggtgcgcgacaaggcagtacagtcattggctgcgatagcctcagaactgccg
acaaagagcgtctcagaatactttgtgccccttgtcaagaggctcgctggaggcgagtgg
ttcacttccaggatttcgtgctgtggcctgctgccagtggcccaccgtgtttcaacacaa
gaaagcgagctccaggagctcaggggcttataccgtgttttgtcacaagacgacacgccc
atggtccggcgtgctgccgctcagaacctcagcggaatggcagagactgtagagcagcag
gttttgagccaagatatctgccccatcttcatcaagctcacacaggacgatcaagactcg
gttcgcttgctggctgtgcaatgctgcggccctttggcacgctcgctaagcaagagcgag
tgcctctcctctgtcgtcccggttgtgcagcggtttgcccaggacaagtcctggcgcgta
cggtacaatgtggcgcaacaattgcacatgctctgtgctgcgctgggcgcggaggcttcc
aggaatgagatagtacccccttttctgaagcttctgcgggatagcgaagcagaagtgagg
gttgccgctgccggcaaggttgcggcgatcagcaacctgctggatgcagacacggtgatc
agggtggtcctgccctgtgtgaaagtgctcgcagctgatagcagtcagtacgtgcggagt
gctcttgctgctgttgtcatggagatggccgcggccctcggcaaatcagccaccattgag
catttgctacctgtcttcctaagccttttaaaggacgatgtcccagatgtgcgactgaat
atcatttccaagcttgatcaggtaaatcaggtgattggaatcgatcttctaggggagagc
ttgatgcccgccatcgaaaatttggcagatgacaaccactggcgggtccgattggctatc
atcaagtacatacccctgctggcaacgcagctaggtgctgatgtattccaacagcaactt
gggcagcagtgcatgaggtggcttgaggatcaggtgttctgcatacgcgaggcagcgaca
ctgaatctgcagaaattggcagcggagtttggtcctgagtgggctaaagagcatcttgtt
cctcaggtcctagccatggtgaacaattcccactacctgtaccgcatgacaatcctctca
gctgttgcagctcttgcacctgctgtcagtcatgacgtcctgtgcaacaatatgctgcca
gtcgtcatatcttgcgcaaaagacaaggttccaaacatcaagttcactgtggcaaagatg
ctggaacgtcttgttcctctggtggatgctgctatcgctgagcacacaatcaagccctgc
ctgctggagcttgctgatgacagcgatgcagacgtgcaattttttgctcagcatgcgctg
cagtcctgcgaaattgttactgctgcgtaa

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