Coccomyxa subellipsoidea: COCSUDRAFT_19582
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Entry
COCSUDRAFT_19582 CDS
T02914
Name
(RefSeq) DEAD-domain-containing protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03013
Nucleocytoplasmic transport
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_19582
03015 mRNA surveillance pathway
COCSUDRAFT_19582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_19582
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSUDRAFT_19582
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCSUDRAFT_19582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
17037363
NCBI-ProteinID:
XP_005643967
JGI:
19582
UniProt:
I0YM04
LinkDB
All DBs
AA seq
461 aa
AA seq
DB search
MFWAQDLSYLSGPSQAGGENGTADEPSPSPQGLQEPEAEDIKTVPAGDTIYASATSFEDL
RLSEDLLKAGGIYTEMKFEKPSRIQALTLPMILTPPHRSLIAQAHNGSGKTTCFTLAMLS
RVDPAVAQPQAICVCPTRELVAQNLMVLEKMAKHTTIKATSSLAGTQNHRITEQVVIGTH
GTLKNWMSKRILSFRFARILVFDEADEMLKMDGFASDSVRMIGTLRKDAQQHVQILLFSA
TFNEKVKNYALRVVRDNGREDANQVFVPREDLSLDVIKQYRVDCPTPLDKVSVLKEMIFP
QCEKLGQTIIFVRTREVARSLHAAMESEGHRCTSIRGDMDNELRDKVVNEFRNGTTKILI
STDVLSRGFDCCGVQVTLVINYDVPVEKDWTTPAYETYLHRIGRSGRFGRKGAAFNLVSG
EQEKRILDSISEYFKHEIPEVPFNDEDEFLEVLKQAGLTDG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgttttgggctcaagatctcagctatctatctggtccgtcacaggctggtggtgagaat
gggactgcagatgaacccagtcccagcccacaagggttgcaggagccggaagctgaagac
attaagacagttcctgctggagacaccatctatgcatcagcaacgtcctttgaggatctc
cgcttgtctgaagacctcttgaaggcagggggcatatacacagaaatgaaatttgagaaa
ccatcgcgcattcaggccctcacgctaccaatgatcctcactcccccacacaggagtctc
atagctcaggcccacaatggcagcgggaagaccacctgcttcacgcttgccatgctcagc
agagtcgacccagcagtagcacagccccaggccatctgtgtctgccccaccagggagctg
gtggctcagaacctgatggtgcttgagaagatggccaaacacacaaccatcaaggccacg
tcctccctggccggcacccagaaccataggatcacagagcaggtggtcataggcacgcat
ggcacgctgaaaaactggatgtccaagcggatcctcagcttcagatttgccagaatcctg
gtctttgacgaggcagatgagatgctgaagatggatggctttgcatcggactccgtgagg
atgattgggactctgcgcaaggatgcgcagcagcatgtgcagatcctgctgttctcggcc
accttcaacgagaaggtgaagaactatgcgctgagggtggtcagggacaatggcagagag
gatgccaatcaggtgtttgtgccgcgggaagacttgtctctggacgtcatcaagcagtac
agggtggactgtccaactccgctggacaaggtgagcgtgctgaaggagatgatcttccct
cagtgtgagaagctgggccagaccatcatctttgtcaggacgagagaggtcgcccgctcc
ctccacgcagccatggagagcgagggccaccggtgcacgagcatccggggcgacatggac
aacgagctgcgggacaaggtggtcaacgagttccgtaacggcaccaccaagatcctcatc
tccaccgacgtcctctcccgcggctttgattgttgtggggtgcaggtgacgctggtgatc
aactatgatgtgccggtggagaaagactggaccactccagcctatgagacctacctgcac
cgcatcgggcgcagcggccgctttgggcgcaagggtgctgcattcaacctggtcagcgga
gagcaggagaagagaatactggactccatctcggagtacttcaaacacgagatcccagaa
gtgcccttcaatgacgaggatgagttcttggaggtgctgaagcaagcagggctcactgat
ggatga
DBGET
integrated database retrieval system
