Coccomyxa subellipsoidea: COCSUDRAFT_19601
Help
Entry
COCSUDRAFT_19601 CDS
T02914
Name
(RefSeq) NLI interacting factor
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_19601
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_19601
Enzymes [BR:
csl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
COCSUDRAFT_19601
Protein phosphatases and associated proteins [BR:
csl01009
]
HAD phosphatases
Fcp/Scp phosphatases
COCSUDRAFT_19601
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
COCSUDRAFT_19601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
17037450
NCBI-ProteinID:
XP_005644026
JGI:
19601
UniProt:
I0YM63
LinkDB
All DBs
AA seq
193 aa
AA seq
DB search
KQDQDRGKKTLVLDLDETLVHSSFKPIPNPDYIIPVEIEGKIVDVYVLKRPWLDHFMNAI
AGCFEVVVFTASLSKYADPLLDLMDKAKVVRWRLFREACCPYEGNYVKDLTCLGRPLPDS
IIVDNSPHSYVFQPDNALPIGTFIDDPNDRELLDILPVLKAVEKVDDVRVTLGTLVQQLA
HNQLQRRSVYGPG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
aaacaggaccaggacaggggcaagaagacactggtgctggatctggacgagacgctggtg
cacagctcgttcaagcccatccccaacccggactacatcatccccgtggagatcgagggc
aagatagtggacgtgtacgtgctcaagcggccctggctggaccacttcatgaatgccatc
gccggctgctttgaggtcgtcgtgttcacagccagcctgtcaaagtacgcagaccccctg
ctggacttgatggacaaggccaaggtggtgagatggcggctgttccgggaagcctgctgc
ccctacgagggcaactacgtgaaggacctgacatgcctggggcggccgctgccggactcg
ataattgtggacaactcgccgcacagctacgtgttccagcccgacaacgcgctccccatc
ggcacgttcatcgacgaccccaacgaccgcgagctgctggacatcctcccagtgctcaag
gccgtggagaaggtcgacgacgtgcgcgtgactctgggcaccctcgtgcagcagctcgcc
cacaaccagctgcagcgccgcagcgtctacgggcccggctga
DBGET
integrated database retrieval system