Coccomyxa subellipsoidea: COCSUDRAFT_1971
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Entry
COCSUDRAFT_1971 CDS
T02914
Name
(RefSeq) DNA/RNA polymerase
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
COCSUDRAFT_1971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_1971
Enzymes [BR:
csl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCSUDRAFT_1971
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
COCSUDRAFT_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
DUF1805
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
17037395
NCBI-ProteinID:
XP_005643819
JGI:
1971
UniProt:
I0YLK6
LinkDB
All DBs
AA seq
454 aa
AA seq
DB search
LAELQYNPNGDLSTLRPDEERIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNL
VQVPVAHGKADLTLYRASGKQVLNILARLSVAERASIDECYLDITEEAKRRLAASSAHPP
LPINVGEVHGEGGTEAWWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGIAH
NKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGEL
SAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVH
KWLGELGDELEERITADRADNERVPRLLTVGMWGEGGPGTSGGSVSRSCQLRRPESQPMA
EDGLKLIKRWASDRPGWAITSLYMTASNFQAAPTGSSTITRFLKPKSAPGQQSPPPSGST
AAQPHRSGALDAPLLLQCTEEVGREVSVVMSNLD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
cttgcggagttgcagtacaacccgaatggagacttgagcacattgcggcctgatgaggag
cggatcttcaacagcagcaatggcagcctcattgcagtcggctacgaggccagagcaaag
ggtgtcaaacggggaatgaggggggatgatgcgcgcaaggtgtgcccagacctaaatctg
gtgcaggtgcctgtggcccatggcaaggcagatctgacgctatatcgagcatccggcaaa
caggtgctcaacattctggcaaggctgtcggtagcggagcgagcctccatcgacgagtgc
tacctggacataacagaggaggccaagaggcggctggcggccagctctgcccacccgccc
cttcccatcaatgtgggcgaggttcatggtgagggtgggacggaggcgtggtggcaccgg
ccggtgggcgcctggggcccagggcagcggctgctggcgtgcggcgcggccgtcgtggca
gaactgcgcgcagccgtcaggcgcgagctaggctacagctgctccgcaggcatcgcacac
aacaagatcctggccaagctggcgtcgggcatgcacaagcccagtcagcagacattagtc
acccttgactgcgtgccgggcctcatggcgggcctccccattcccaagctgcgccagctg
ggcggcaaatttggcgaggagatcatgacagcgctcaacatcacaaccgtgggtgagctg
tcagcggtgccgctgcggcgactggaggcggtgtgtagccaggccgacgcgctctggctg
caccgcctctcccgaggcatcgacgacgaagaggtgaaggagcggcagctgccgcagtcg
atctcatgcggcaagacattccggggccacacggcactgaaagccttcccggcagtccat
aaatggctgggggaactcggcgacgaacttgaagagcgcattacggcagaccgtgctgac
aacgagcgcgtgccccgccttctcacggtgggcatgtggggggaggggggcccgggcacg
tctgggggcagcgtgtcacgctcatgccagctgcgccgaccagagtcacagcccatggca
gaagacggcctcaaactgatcaagcggtgggcgtctgaccgacccggctgggcgatcaca
tccctctacatgacagcctctaacttccaggcggctcccactgggtcatccacaatcaca
cgcttcctcaagcccaaatcagcgccaggtcagcagtcaccgcccccttcagggtccact
gctgcgcagccgcacagaagcggcgccctggacgctccgctgctattgcagtgcaccgag
gaggtgggtcgggaagtctctgttgtgatgtcaaacttggat
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