Coccomyxa subellipsoidea: COCSUDRAFT_20324
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Entry
COCSUDRAFT_20324 CDS
T02914
Name
(RefSeq) RNA-binding domain-containing protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_20324
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_20324
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
COCSUDRAFT_20324
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
COCSUDRAFT_20324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
17036699
NCBI-ProteinID:
XP_005643314
JGI:
20324
UniProt:
I0YK51
LinkDB
All DBs
AA seq
351 aa
AA seq
DB search
MQGFQQAVSQNPARLGSGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTG
LSAGYGFVQFLDHRAADMALQSLNGRVLHGQELRVNWAFQKDQREDSASQFQIFVGDLAS
DINDKLLCEAFQSCGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRR
IRCGWAQHKQENSQASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFG
AVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARKGGPGGAQL
PVDPASFDYLALQQQQLQQQLAMQQLGYAPAGYAAQVCPLPMHHPHAKLAV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcagggattccagcaggccgtgagccagaacccggccaggctgggttctggcgacgct
gcgaaggccctctatgtcgggaacttgcatcccttcgttacagatgctatgctgcaggaa
atcttctcaaccctgggccaggtcggcgaaatcaagatcatcaaggacaagctgacaggc
ctgagcgcgggatatggtttcgtgcaattcctagatcatcgggccgctgacatggccctg
cagtctttgaacgggagggtgctccacgggcaggagctccgagtaaactgggctttccag
aaggatcagcgggaagactcagcttcccagttccagatcttcgtgggggacctggctagc
gacatcaacgataagctgctgtgtgaggcctttcagagctgcggctgcgcagatgcccgc
gtgatgtgggaccacaatacagggcgctcaaagggctatggtttcgtgtcgttcaagaca
cgagccgacgcagagcaggcgctgtcacagatgagcggcacgatgctggggtcgaggagg
atacgatgcggctgggcgcagcacaagcaggagaactcgcaggccagcttcgccgctgtc
gaccgggtgtccactctttcacgcgcacaggcggaccccgagaacgcgaacgtgtacgtg
ggcaacctggcgccggacgtgtcagacgcggagctgcagacggcggtcagccagtttggg
gcggtgctggacgtcaagatctaccgaaagggcggctacgcgttcgcgcagtttgccagc
cacgcggacgccgtgcgcgcgatcgtggggctgtcggggcagaatctgggcggcaaggcg
ctcaagtgcagctggggccggcaccaggcgcgcaagggcggccccggcggcgcgcagctg
ccggtggacccggcctccttcgactacctggcgctgcagcagcagcagctgcagcagcag
ctcgccatgcagcagctcggctacgcccccgccggctacgctgcgcaggtgtgccctctc
cccatgcaccaccctcatgcaaaactggctgtctga
DBGET
integrated database retrieval system
