Coccomyxa subellipsoidea: COCSUDRAFT_20380
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Entry
COCSUDRAFT_20380 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_20380
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSUDRAFT_20380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_occluded
DUF8400
RRM_ACIN1
RRM_10
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
17036654
NCBI-ProteinID:
XP_005643269
JGI:
20380
UniProt:
I0YK06
LinkDB
All DBs
AA seq
876 aa
AA seq
DB search
MTSRICVKGLPKQCSDQQLREHFSEKGDITDAKIMRTEDGHSRQFGFVGFRSVAEAQAAV
KYFNRSFMGAQRLTVEFAEKFRGSHLPRAWSKYTEGSSRYQKLHQDEENEEKPKGVRELK
KLKKQQRMGGTAPEEEDPKLAEFLQLMQPRRAGAIWSNEDTELAAAAAQTRTAAGKAGST
APEASNGGEALAGDRRQASKGGKMQAVPAQKDAAVVDTGVSDMDYLRSRVTGNFDESASD
EDNLEDEDAGIEGAVSITYAIERKAVHAGDVAAQQAGAEASDDSDGDELDLDRMGSHGKA
GTNIGGEGSAAEEVRAQTKEARIEETGRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVV
DKATRKSKGFALIQYEEVADAITAKEELDESIFQGRLLHVLPAHRPPPQRSAAQAEARPR
TDSLLRKQLACLTSICREGAGNRAAWNTLFMRPDTVAAAVAEHYGVSRAELLDRDASDLP
VRMALGETHVIAMTKRALGEAGVDVAALEAAAAAGGRAAAKTAVARSPTTLLVKNLPYTA
SEAELEETFGKLGAIARLVLPPTRTLALVQFAEAADARRAFKALAYKRFQSVPLYLEWAP
ADVFSPDAPLQPRLQAQAVVAKKAKKVDTDEPVEVADLPAGDDEAESTTIYVKNLAFATT
DATLRAHFDAVVSAAGGSIRAASVAKRKGPDGKPLSSGFGFIECSSEDVAKIAIKKQQGS
ILDGHKLALQLSLRKVGGKAAKPSAKETAAAADTGKAKGTKLVVRNVAFEATRKDVAALF
APFGQIKSCRLPKKFDGSHRGFAFVDFLTKQEAKSAAEAVAGTHLYGRRLVVEWAEADEA
GLDELRAKTAARFRPDEDAAGDQHPAKKQRKNLDFV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcgcatctgcgttaagggcctcccgaagcagtgctcagaccagcaattacgc
gagcatttttccgaaaagggagacataacagatgccaagatcatgcgcacagaggatggg
cattccaggcagtttggctttgtgggcttccgctcagtggctgaagcgcaggcggcagtc
aagtatttcaatcgctccttcatgggggcacagcgcctgactgtggaattcgctgaaaag
ttcagaggcagccatctgccccgtgcctggagcaagtacacggaaggaagcagccgctac
cagaagctgcatcaggatgaggagaatgaggagaagccaaagggcgtccgggagctgaag
aagctgaagaagcagcagcgcatggggggcacagcacccgaagaagaggatccaaagctg
gcggagttcctgcagctgatgcagccgcggcgcgccggcgcaatctggtcaaacgaagat
actgagctggcggcggcggcggcgcagacgcgcaccgccgccggcaaggctggcagcact
gcccctgaggcatccaacggcggcgaggctctggcaggggataggcggcaagcaagcaaa
ggcggaaagatgcaggctgtccctgcccagaaggatgcagcggtggtggatactggtgtt
tcagacatggactacctgcgctcgagggtgaccggcaattttgacgagtcggcctcagat
gaggacaatctggaggatgaagacgcaggaattgaaggtgcagtgtctatcacctatgct
attgaaagaaaagcggtgcatgcaggggatgttgccgctcagcaggctggcgctgaggcg
tccgatgacagtgacggggacgaattggaccttgatcgcatgggcagccatggcaaggcc
ggcaccaatattggcggagaagggagcgcagcggaggaggtcagggcgcagacgaaggag
gcaagaatcgaggagaccggacggctgtttgtgcggaacctgccgtactcagcgaccgag
gctgacctggcggaggcctttgggcagcacgggcagctctccgaggtgcacatcgttgtg
gacaaggcgacgaggaagtccaagggctttgccctgatacaatatgaggaggtggctgat
gctatcacagcgaaggaggagctggatgagtccattttccagggccgcctgctgcatgtg
ctccccgcgcaccggcccccgccgcagcgcagcgcagcgcaggccgaggcacgcccccgc
acggactctttgctgcgaaagcagctggcctgccttacttccatttgcagggagggcgcc
ggaaaccgcgcggcgtggaatactctcttcatgcggccggatacggtggcggcagcagtc
gcggaacactacggcgtctcgcgggccgagctgctcgaccgcgatgcctccgatctgccg
gtgcgcatggcgttaggcgagacgcacgtaatagcaatgactaagcgcgcgcttggcgag
gccggcgttgacgtggcggcgcttgaggcggcggctgcggccggtggcagggcggccgca
aagacagctgtcgctcgcagcccaaccacactactcgtcaagaacttgccgtatactgcc
agcgaggccgagctggaggagacctttggcaagcttggggcaatagcacggctggtgctg
cccccaacgcgcacactggcgcttgtgcagttcgcagaggcggccgacgcgcgccgggca
ttcaaggcgctggcctacaaacgtttccagtctgtgccgctctatttggagtgggcaccc
gccgatgtcttcagccctgacgcgcccctgcagcctcgactccaggcgcaggccgtcgtt
gccaagaaggccaagaaggttgacacagatgagccggtggaagtggctgacctgccagct
ggcgatgacgaggcagagtccaccaccatctatgtgaagaacttggcctttgccaccacc
gacgccacactcagggcgcatttcgacgcggttgtgagcgcggcgggaggcagcatccgc
gcagccagcgtggcaaagaggaagggcccggacggcaagccgctgtcgtcgggcttcggc
ttcatcgaatgctcctctgaggacgtcgccaagattgccatcaagaagcagcaggggtcc
atactggacgggcacaagttggcgctgcagctcagtttgcgcaaggtgggcggcaaggct
gcaaagccttctgccaaagagacggcggccgctgccgacaccggcaaggccaaggggacg
aagctcgttgtgcggaatgtggcgtttgaagccacgcgcaaggacgtggccgccctgttt
gcgccctttgggcagattaaaagctgccggctgcccaagaagtttgacggcagccacagg
ggctttgcgttcgtggacttcctgacaaagcaggaggccaaatccgcggctgaggcggtg
gctggcacgcatctgtacgggcgccggctggtggtggaatgggcggaggctgacgaggcc
ggcctggatgagctgcgcgcaaagacggccgcacgcttccggccggacgaggacgccgcg
ggagaccagcacccggccaagaagcagcgcaagaatctggactttgtctag
DBGET
integrated database retrieval system