Coccomyxa subellipsoidea: COCSUDRAFT_21573
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Entry
COCSUDRAFT_21573 CDS
T02914
Name
(RefSeq) Qb-snare protein, VTI1-family
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSUDRAFT_21573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_21573
Membrane trafficking [BR:
csl04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
COCSUDRAFT_21573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
PLU-1
Fusion_gly
OmpH
KIF21A
Motif
Other DBs
NCBI-GeneID:
17045829
NCBI-ProteinID:
XP_005652358
JGI:
21573
UniProt:
I0ZAZ5
LinkDB
All DBs
AA seq
229 aa
AA seq
DB search
MATINLGDQMALFNQYDSEYCTKATDVARKVQAVSSLGSDSRRSKLRELESDFKEAEQIV
KRMEMEARSFSADRSRPLLTKVKEYKADVAKLRESAQAAAASTPGGAAARAELGLMDDYS
QTSSGQRERLLQTTEKLGRTGERITQGRQQLLETEELGVSILQDLHRQRQTIGHARDTLH
GADDNIAKARRVLSSMSRRITTNKLIAGAIILLLLAAIVLVVYYKFIKK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggctacaataaatttgggggatcagatggcactcttcaaccagtatgacagcgagtac
tgcacaaaggccacagacgttgccagaaaagtacaagcagtgagcagtcttggatcagat
tcgcgccgatcgaagctcagagaacttgagtcggacttcaaggaggctgagcagatcgta
aagaggatggagatggaggcaaggagcttttcagcagaccgatccagacctctccttaca
aaggtgaaggagtataaggcggatgtggcgaagctgcgggagagcgcgcaggcggcggct
gcatcaacaccggggggagcggcggcgcgcgcagagctggggctgatggatgactacagc
cagacgagctctgggcagcgggagcggctgctgcagacgacggagaagctgggccgcact
ggggagcgcatcactcagggacgccagcagctgctggagacggaggagctgggagtgagc
atcctacaggatctgcaccggcagcgacagacgatcggccacgcgcgagacacgctgcac
ggcgcagacgacaacatcgccaaagccaggagagtgctgtcctccatgtcgcggcgcatc
acaaccaacaagctcatcgccggcgccatcatcctcctgctgctcgccgccatcgtgctc
gtcgtgtactacaagttcatcaagaagtga
DBGET
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