Coccomyxa subellipsoidea: COCSUDRAFT_221
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Entry
COCSUDRAFT_221 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSUDRAFT_221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_221
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
COCSUDRAFT_221
SWR1 complex
COCSUDRAFT_221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
AAA_14
Motif
Other DBs
NCBI-GeneID:
17036713
NCBI-ProteinID:
XP_005643328
JGI:
221
UniProt:
I0YK65
LinkDB
All DBs
AA seq
861 aa
AA seq
DB search
AARPLPAAAEPKRTKTHRDFLLEEMAWLAKEFQKERSWKMKQAKKYVRAVVRSNMDVESR
AVVRQREAELAIRRRAAWIGKEVMQFWKKAERVVAYKQQSVVDARKKEAMDKHLSFLVGQ
TQKYSSLLAQRLAANDQDLPALLSPPPILFQHGLPQTVQTFSRTSFSTIAQRGVFAFVAQ
VPFLLKGSLREYQHVGLEWLITIYTRRLNGILADEMGLGKTIMTISLLAHLACEKGVWGP
HLIVVPTSVMLNWEVECKKWCPAFKLLTYYGSAKERKAKRQGWSKPNAFHICITSYTLVL
QDAKMFRRKKWKYLILDEAHMIKNWKSQRWQTLLNFNSQRRLLITGTPLQNDLMELWSLM
HFLMPQVFASHAQFKDWFSNPLTGMVEGQEAVNKALVERLHGVLRPFLLRRLKSEVEKQL
PGKHEHVVRCRLSKRQRTLYEDYMASSDTASTLTSGNFLGIINVLMQLRKVCNHPDLFEG
RPIVSAFDMVGGLSAQLPSATRCGKTGLLKVPAICVQVLQTPKQLIEELNASKAEQRGDQ
SGLSISFVVSNGFLHAKDLIFMSMSSNSRCAVALMQNFVFSFGHVTLNIFPDRGRHLDFA
DAVADAVQTCQMRAEQLDDELKTFMFVIPRARAPPPEIWCSRPDPSAVAEAAARAAALQA
EVFARSAPLRTAIVRQQLFFPDRRLIQFDCGKLQARPPMPDTLLRRLKSGDHRALIFTQM
ARMLDILEVFLNLHGYSYLRLDGTTKPEQRQILMQRFNTNPKLFVFILSTRSGGVGMNLT
GADTVIFYDSDWNPAMDAQAQPPHPLTWKHCLDRCHRIGQTREVHIYRLVSERTIEENIL
TKSDQKRQLDHLAIQSGGFNT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gcggcgcggccgctgccggctgcggccgagcccaaacgcaccaaaacacacagggacttc
ctcctcgaagagatggcctggctcgccaaggagttccagaaagagcggagctggaagatg
aagcaggcaaagaagtacgtgcgcgctgtggtgcgctccaatatggacgtggagtcgcgc
gcggtcgtgcgccagagggaggccgagctcgcaatccgccgccgggctgcatggatcggc
aaagaagtcatgcagttctggaagaaggcggagcgggtggtggcgtacaaacagcagagc
gtggttgacgcgcgcaagaaggaggccatggacaagcacctctccttcctggtcggccag
acccagaagtactccagcctcctcgcccagcgcctggcagccaacgaccaagacctcccc
gccctgctctcgccgccacccattctgttccaacatggactgccgcagacagtgcaaacc
ttttcgagaacatctttcagcactattgctcagcgcggtgtgtttgcgtttgtcgcgcag
gtaccgttcctgctgaagggatcactgagggagtaccagcacgtggggctggagtggctg
atcaccatctacacgcgtcgcctgaacggcatcctggccgacgagatgggcctcggcaaa
accatcatgaccatctccctgctcgcccaccttgcctgcgaaaagggcgtgtggggcccg
cacctgatagtggtgccgacgagcgtgatgctgaactgggaagtggagtgcaagaagtgg
tgccccgccttcaagctgctcacctactacggcagcgccaaggagcgcaaggccaagcgc
cagggctggtccaagcccaatgccttccacatctgcatcacctcctacaccctcgttctc
caggacgcaaagatgttccggcggaagaagtggaagtacctgatcctggacgaggcacac
atgataaagaactggaagagccagcggtggcagacgctgctcaacttcaactcgcagcgc
cgcctgctcatcactgggacgcccctgcagaacgacctcatggagctctggtccctcatg
cacttcctcatgccacaggtgtttgccagccatgcgcagttcaaggactggttctccaac
ccgctgaccggcatggtggaggggcaagaggcagtcaataaggcgctggtggagcggctg
cacggcgtgctgcggccattcctgctgcggcggctgaagagcgaggtggagaagcagctg
ccgggcaagcacgagcacgtggtgcgctgccgcctctccaagcgccaacgcacgctgtac
gaggactacatggcctcctccgacaccgcctccaccctcacctccggcaacttcctgggc
atcatcaacgtcctcatgcagctgcgcaaggtgtgcaaccacccggacctgttcgagggg
cggcccatcgtctcggcatttgacatggtggggggcctcagcgcgcagctgccctcagcg
acaaggtgtggaaagaccgggttgctgaaggtgccggcaatatgtgtgcaggtgctgcag
acgccaaagcagctgatagaggagctgaacgcctctaaggctgagcagcgtggcgaccag
agcggcctcagcatatcttttgtggtgagtaatggctttctgcatgcaaaagatctcatt
tttatgtccatgtcatcaaacagcaggtgcgctgtcgctcttatgcagaattttgtgttc
tcctttgggcatgtgactctaaacatatttccagatagggggcgccacctggactttgcg
gatgctgtagccgatgcagtccagacgtgccagatgcgcgcagagcagctggatgacgag
ttgaagaccttcatgttcgtcatccccagggcgcgggcccccccgccagagatatggtgc
agccgtccggacccgagcgcagtcgcagaggcggccgcgcgcgcggcggcgctgcaggcg
gaagtctttgcgcgatcagcgcccctgcgcacggccatcgtgcggcagcagctcttcttc
cccgaccggcggctgatccagtttgattgcggcaaactgcaggcacggcctcccatgcct
gacactctgctgcggcggctgaaatctggcgaccacagagccctcatcttcacccagatg
gcgcgcatgcttgacatcctggaggtgtttctgaacctgcacggctacagctacctgcgc
ctggacggcacaaccaagcccgagcagcgccagatcctcatgcagcgcttcaacaccaac
cccaagctcttcgtcttcatcctttccacgcgctccggcggcgtcggcatgaacctcacg
ggcgccgacaccgtcatcttctacgactctgactggaacccagccatggacgcccaggca
cagccccctcatccccttacttggaaacactgtctcgacaggtgccaccgcatcgggcag
acgcgtgaggtgcacatctaccgactggtgagcgagcgcaccatcgaggagaacattctg
accaagagcgaccagaagcgccagctggaccatttagccatccagtccggcggcttcaac
acc
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integrated database retrieval system
