Coccomyxa subellipsoidea: COCSUDRAFT_22862
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Entry
COCSUDRAFT_22862 CDS
T02914
Name
(RefSeq) farnesyl diphosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00900
Terpenoid backbone biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Module
csl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
COCSUDRAFT_22862
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csl01006
]
COCSUDRAFT_22862
Enzymes [BR:
csl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
COCSUDRAFT_22862
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
COCSUDRAFT_22862
Prenyltransferases [BR:
csl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
COCSUDRAFT_22862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
17042508
NCBI-ProteinID:
XP_005649050
JGI:
22862
UniProt:
I0Z1I7
LinkDB
All DBs
AA seq
339 aa
AA seq
DB search
MKVYTVLTDELVADELIAGQPSFSADYMRRMLDYNVPGGKLNRGLAVGDILGHLQKDEAR
PLNSTEMQMFEANVLGWCIEWLQAFFLVADDIMDNSITRRGQPCWYRAEGVGLVACNDYI
ILESCIYRILKKHFGQKPYYGLLLDFFHETTHQTAHGQLLDITTAPIGTVDLSKYTEETY
LRIVTFKTAFYSFYLPVVCGLLVGGTNSEAAFNTAKDICIQMGQYFQIQDDYLDCYGDPE
VIGKVGTDIQDNKCSWLVVQALKRASAAQLEVIKEHYGRDNEESIQRIKEVFVELELERV
FKEYEQASYEKLSAEISTQKELPAEVFTALLKKIYKRQK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatacacagtgctgacggatgagctggtcgctgatgagctgattgctggccaa
ccgtccttctcagcggattacatgcgcaggatgctggactacaatgttccaggaggcaag
ctgaaccgagggttagccgtgggggacatcctgggacacctacaaaaggacgaggcaaga
cccctcaacagcactgaaatgcaaatgtttgaggcaaatgttctggggtggtgcatcgag
tggttgcaagctttcttcctggtggcagacgacatcatggacaactccatcactcgaagg
gggcagccctgttggtacagagccgagggggttgggttggtggcatgcaatgactacatc
attctggagtcctgcatctatcgcattttgaagaagcactttgggcagaagccctactac
ggcctgctcctagacttcttccacgagaccacgcatcagacagcccatgggcagctcctg
gatatcaccacagcgcccattggcacagtggatctgtccaagtacaccgaggagacctac
cttcgaattgtcaccttcaagacagctttctattctttctacctgcctgtcgtctgcggc
ctgcttgttgggggcaccaacagcgaggctgctttcaacacagccaaggacatctgcatc
cagatgggccagtacttccagatccaggatgactatctggactgctatggcgacccagag
gtgatcggcaaagtgggcactgacatccaggacaacaagtgttcgtggcttgtggtgcag
gcccttaaaagagccagtgcggcccagcttgaggtcataaaggagcactatggcagagac
aatgaagagtccattcagaggattaaggaagtctttgtcgagttggagttggagcgggtg
ttcaaggagtatgagcaggccagctatgagaagcttagcgcagagatctccacgcagaag
gagctgcctgcagaggtcttcacggcgctgttaaaaaagatctacaagcgacaaaagtaa
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