Coccomyxa subellipsoidea: COCSUDRAFT_23167
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Entry
COCSUDRAFT_23167 CDS
T02914
Name
(RefSeq) R-SNARE protein, VAMP72-family
KO
K08515
vesicle-associated membrane protein 7
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSUDRAFT_23167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_23167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_23167
Membrane trafficking [BR:
csl04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
COCSUDRAFT_23167
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSUDRAFT_23167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
DUF7121
Fzo_mitofusin
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
17041898
NCBI-ProteinID:
XP_005648444
JGI:
23167
UniProt:
I0YZT1
LinkDB
All DBs
AA seq
221 aa
AA seq
DB search
MPLIYAFVARETAVLADHTGPQFTGNFKSVAVQCLDRVPSGNNKFTFTANQHSFNFLIDG
GYTFLVVADEGFGRQVPFAFLENVKNEFNQKYAEKSRTAQAGSLDRAFGPRLKYHMDYCM
EHPEELSKVAGLQKKVDEVKNVMVDNIEQVLARGERIENLVDKTDNLRNQADRFHRTGVA
LRRKMWWQHKKMWLIVILIILILALVIFLSVCFSGGNCFKN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcatatatgcattcgtggcaagggagacggcagtgctagcagaccacacaggg
ccacagttcacaggcaacttcaagtctgtagctgtccagtgcttggacagggtgcccagt
ggaaacaacaaatttacatttacagccaaccagcactcgttcaatttcctcatagatgga
ggctacactttcctcgtcgtggctgatgaaggatttggacgtcaagtgccctttgcgttc
ttggagaacgtgaagaacgagttcaaccagaaatatgccgaaaagtcacggacggcacag
gcaggcagcctggacagggcgttcgggccgcggctgaaataccacatggattactgcatg
gagcatccagaggagctgtccaaggtggccggcctgcagaagaaggtggacgaggtcaag
aatgtcatggtggacaatattgagcaggtgctggcgcggggtgagcggattgagaacctg
gtggacaaaacggacaacctgcgcaaccaggcggaccggttccaccgcactggagtggcg
ctgcggcgcaagatgtggtggcagcacaagaagatgtggctcatcgtcattctcatcatc
ctcatcctggccctcgtcatcttcctctccgtctgcttctccggcggcaactgcttcaag
aactga
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