Coccomyxa subellipsoidea: COCSUDRAFT_23859
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Entry
COCSUDRAFT_23859 CDS
T02914
Name
(RefSeq) putative trytophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_23859
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_23859
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_23859
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
COCSUDRAFT_23859
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
COCSUDRAFT_23859
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCSUDRAFT_23859
Prokaryotic type
COCSUDRAFT_23859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
17041272
NCBI-ProteinID:
XP_005647828
JGI:
23859
UniProt:
I0YY15
LinkDB
All DBs
AA seq
411 aa
AA seq
DB search
MRPAFVARILGCRRILDQPSGHSNRRMEGTVNSCRGRLVCTAATSTSETVTQESKSRLPQ
EPAAPRRQRVFSGVQPTGTLHLGNYLGAIRNWVKMQDLYDTFFCVVDMHAITMPHEPRDL
VEATRKSAALYLASGINPDKAAIFVQSHVSAHAELAWLLQCYTPIGWLRRMIQFKEKSQK
QNAEEVGAGLLTYPVLMAADILLYGTDLVPVGEDQRQHIELARDIAERFNYKFGGSKWKK
LGGRGGKIFKIPEAFMPPAGARVMSLSDGTSKMSKSAESDGSRINLLDPPDVLANKIKRA
KTDVFKGLEWDNPDRPEATNLITIYSLVTGMSTGAAVEEVCDLSWGEFKPRLADAVVSHL
EPLQQRYKLIMDDEHYLDEVLAQGADKAEEAANRTLNNVRQAMGFQARVRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccagcttttgttgcacggatactgggctgcagacgcatcttagaccagccctct
ggacattcaaatagaaggatggaggggaccgtgaactcttgcagggggcgattggtatgc
actgcagcaacaagcacttcagagacagtgactcaggagtccaagtcaaggctgcctcag
gaacctgctgcacctcggaggcagagagtcttctcaggggtccagcccactgggacgctc
cacttaggcaactatttgggagccatccgtaattgggtgaagatgcaggacctgtatgac
accttcttctgtgtggtggacatgcatgcgatcacaatgccacacgagccccgagacctt
gtagaggcgaccaggaaatccgcagcgctgtacctagcatccggcatcaatcctgacaag
gccgccatcttcgtgcagtcccacgtcagcgcccatgctgagctggcctggctgctgcag
tgctacacgcccatcgggtggctcaggcgcatgatccagttcaaggagaagtcgcagaag
cagaatgctgaggaggttggggctgggctcttgacatatcctgtgctcatggctgctgac
attcttctgtacggcacagatcttgtccccgtgggggaggaccaaaggcagcacatagag
ctggcgagggacatagcagagcgattcaactacaagttcggggggtcaaagtggaagaag
ctgggcggccgcggcgggaagatattcaaaatccccgaggctttcatgcccccggccggc
gcgcgtgtcatgtctctttcggatggcacgagcaaaatgagcaagtctgcagagtcggac
gggtcccgcataaacttgcttgatccgccagacgtgctcgccaacaaaatcaaacgcgca
aagacagatgtgttcaagggattggagtgggacaaccctgaccggccagaggccaccaat
ctgatcaccatctactcactcgtcactggcatgagcacaggggctgcggtggaggaggtg
tgtgatttgtcctggggagagttcaagcctcgcctggcagatgcggttgtttcgcatttg
gagccactgcagcagcgctacaagcttatcatggatgatgagcactacctggatgaggtc
cttgctcagggcgccgacaaagcggaagaagctgcaaaccggacactgaacaatgtccga
caggctatgggcttccaagcaagggtgagaaggtag
DBGET
integrated database retrieval system
