Coccomyxa subellipsoidea: COCSUDRAFT_24706
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Entry
COCSUDRAFT_24706 CDS
T02914
Name
(RefSeq) UV excision repair protein Rad23
KO
K10839
UV excision repair protein RAD23
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03420
Nucleotide excision repair
csl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCSUDRAFT_24706
09124 Replication and repair
03420 Nucleotide excision repair
COCSUDRAFT_24706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csl03051
]
COCSUDRAFT_24706
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_24706
Proteasome [BR:
csl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
COCSUDRAFT_24706
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
COCSUDRAFT_24706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
UBA_3
Rad60-SLD
UBA_RAD5A
Rad60-SLD_2
UBA_9
DUF3391
Ubiquitin_5
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
17039542
NCBI-ProteinID:
XP_005646102
JGI:
24706
UniProt:
I0YT39
LinkDB
All DBs
AA seq
382 aa
AA seq
DB search
MAPVKVTFKTVQGNKFELELDSSDKIENVKQKIEGVQGADFPAANQVIIYQGKVLKDDTT
LEENKITHENFVVVMIQRARKAASPKKEEPAAPTTTAPAPAEAAPTAPAAEVPAQQPRAA
AVPAAAAAAPAAGAAAGDLNSNSLLMGTQLESTIAGIVEMGFDREEVVRAMRAAFNNPDR
AVEYLMTGIPNNVEAPAPAPGASPAAGAVSAAPAAGTPATGGGPASGPNAQPLDMFAPQA
PAGAGGAGGAAGPLDFLRSNPQFIALRQIVQSNPMILQPMLQELGKQNPELLTLINANQQ
EFLRIINEPPSVIMFWLTVRLLLFAALPPGAVAVHLTEEEQAAIQRLETLGFDRNRCIEA
FLLCERDETLAANFLFDSAMDE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaaggtcaccttcaagactgtgcagggcaacaagttcgagttggaactc
gactcttctgacaagattgaaaatgtgaagcagaagattgaaggtgtgcaaggggccgat
ttccctgcagccaatcaagtcatcatctaccagggcaaggtgctgaaagacgacactact
ttggaagaaaacaaaattacgcacgagaacttcgtggtggtcatgatccagagggcaaga
aaagctgcttcaccaaagaaggaggaacctgcagcgccaacaaccacagcacctgctcct
gctgaggctgcacccacagctccagcagccgaagtgcctgcacagcagccgagggctgca
gcggtcccagctgcagcggcagctgcacccgccgccggagctgcagccggcgacctgaac
tccaactccctcctgatgggcacccaattggaatccaccatcgctgggattgtggagatg
ggctttgaccgcgaggaggtggtccgcgcaatgcgcgcggccttcaacaaccccgaccgc
gcggtggagtacctcatgacgggcattcccaacaacgtcgaggcccccgcccccgcgcca
ggcgcatcccccgccgccggcgccgtgtcggccgcgccagccgccggcacaccggccact
ggcggcggccccgccagcggccccaacgctcaaccccttgacatgttcgccccccaggct
ccagctggcgctgggggagcaggcggcgcggcagggcccctggacttcctgcgctccaac
ccccagttcatcgccctgaggcagattgtgcagagcaaccccatgattctccagcccatg
ctgcaggagctgggcaagcagaacccggagctgctgacgctgatcaatgcgaaccagcag
gagttcctgcgcatcatcaacgagccgccgagcgttatcatgttttggctgactgtgcgg
ctgttgctgtttgcagcgctgccgccgggtgcagtggcggtgcacctgacggaggaggag
caggcagccatccagcggttggagacgctgggatttgaccgcaaccgctgcattgaggcc
ttcctgctctgcgagcgcgacgagaccctcgccgcaaacttcctcttcgacagcgccatg
gacgagtag
DBGET
integrated database retrieval system
