Coccomyxa subellipsoidea: COCSUDRAFT_25284
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Entry
COCSUDRAFT_25284 CDS
T02914
Name
(RefSeq) light-harvesting complex I protein
KO
K08911
light-harvesting complex I chlorophyll a/b binding protein 5
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00196
Photosynthesis - antenna proteins
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
COCSUDRAFT_25284
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
csl00194
]
COCSUDRAFT_25284
Photosynthesis proteins [BR:
csl00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
COCSUDRAFT_25284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
17038489
NCBI-ProteinID:
XP_005645057
JGI:
25284
UniProt:
I0YQ44
Structure
PDB
PDBj
LinkDB
All DBs
AA seq
259 aa
AA seq
DB search
MANAVAMSSLLGSKSAVAARPAAFSGKARTARVQARFVAVSAADRQVWFPGNAPAPHLDG
SLPGDFGFDPLSLGSDPQLLKWFQQAELVHGRTAMTAVAGILFPAVATKAGVVNIPQWYD
AGSVWVQNNPNFPFAALLFIQIILTGWVETKRWLDFKNPGSQADGSFLGVTDDFKGVANG
YPGGKLFDPFGLSRGSEGQLQKYQENEIKNGRLAMVAFLGFIAQHAATGKGPIDNLADHL
ANPTAVTFATNGVSLPFVH
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcagttgccatgagttccctgctgggctccaagagcgcggtggcagcccgc
cccgcagcgttcagtggcaaggctcgcacagctcgcgtgcaggccaggttcgttgctgtc
agtgcagcagacaggcaggtctggttcccaggcaatgcccctgcaccccacctggatggc
tcgctcccaggagactttgggttcgaccctctgtcacttggatcggacccacagctgctg
aagtggttccagcaggcagagcttgtgcacggcaggactgccatgacagctgtagcagga
atcctcttccctgcggtggccaccaaggcgggtgtggtgaacattccccagtggtacgac
gccggctctgtgtgggtccagaacaaccccaacttcccctttgccgcgctgctgttcatc
cagatcatcctgaccggctgggtggagaccaagagatggctggacttcaagaacccaggc
agccaggccgacggctccttcctgggcgtgaccgatgacttcaagggcgtggccaatggc
tacccgggtggcaagctcttcgaccccttcggcctctcccgcggctctgagggccagctc
cagaagtaccaggagaacgagatcaagaacggccgccttgccatggttgccttccttggc
ttcatcgcccagcacgccgctaccggcaagggccccattgacaacctggccgatcacttg
gccaaccccacagccgtcacctttgccacaaacggcgtgtctctgccattcgtgcactag
DBGET
integrated database retrieval system
