Coccomyxa subellipsoidea: COCSUDRAFT_25771
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Entry
COCSUDRAFT_25771 CDS
T02914
Name
(RefSeq) R-SNARE protein, VAMP72-family
KO
K08515
vesicle-associated membrane protein 7
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSUDRAFT_25771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_25771
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_25771
Membrane trafficking [BR:
csl04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
COCSUDRAFT_25771
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSUDRAFT_25771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
ATG31
Adeno_E3_CR2
Spectrin_Anc-1
Caulimovir_coat_dom
Motif
Other DBs
NCBI-GeneID:
17037374
NCBI-ProteinID:
XP_005643794
JGI:
25771
UniProt:
I0YLI1
LinkDB
All DBs
AA seq
221 aa
AA seq
DB search
MPLIYAFVSRGTTVLADYTTYTGNFATVAIQCLDKLNTSSANSKVAFNCDHHTFNYLVDG
GYTYLVVADEKFGRQIPFAFLDKVKAEFAEKHAESSRTLHAHSLDKIFGPRLKYWMDYCQ
EHPDEMNKIASVQKKVDEVKNIMVDNIEKVLERGEKIELLVDKTDNLRFQADRFHKTGRQ
LRSKMWWQNMKMKLIIAAVVVVLAFIIFLMACFSGRNCLKH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcatctacgctttcgtgtcgagagggaccactgtcttggcggactacacaact
tacaccggcaactttgcaactgttgctattcagtgcttggataagctaaacacttcttct
gcaaattccaaggtcgctttcaattgcgatcaccacaccttcaactaccttgtcgacggg
ggctacacatacttggtagtggcggacgagaagttcggacgtcagatacccttcgcgttc
ttggacaaggtcaaggctgaatttgccgagaagcatgcagagtccagccgcacactccat
gcccacagcctggacaaaatctttgggccccggctaaagtactggatggactactgccaa
gagcacccggatgagatgaacaagattgcgtccgtgcagaagaaggtggacgaggtgaag
aacatcatggtggacaacattgagaaggtgctggagcgcggcgaaaagatcgagctgctc
gtggacaagacagataacctgcgcttccaggctgacaggttccacaagacagggcgccag
ctgcgcagcaagatgtggtggcaaaacatgaagatgaagctcatcattgcggctgtggtg
gttgtgcttgcctttatcatcttcctcatggcatgcttcagcggcaggaactgcctcaag
cactga
DBGET
integrated database retrieval system
