KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_2628
Entry
COCSUDRAFT_2628   CDS       T02914                                 
Name
(RefSeq) ATP-dependent DNA helicase
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03440  Homologous recombination
csl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    COCSUDRAFT_2628
   03460 Fanconi anemia pathway
    COCSUDRAFT_2628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csl03032]
    COCSUDRAFT_2628
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_2628
Enzymes [BR:csl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COCSUDRAFT_2628
DNA replication proteins [BR:csl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    COCSUDRAFT_2628
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     COCSUDRAFT_2628
    Bloom's syndrome complex (BTR)
     COCSUDRAFT_2628
   FA (Fanconi anemia) pathway
     COCSUDRAFT_2628
SSDB
Motif
Pfam: DEAD Helicase_C RQC RecQ_Zn_bind ResIII DUF5506
Other DBs
NCBI-GeneID: 17044695
NCBI-ProteinID: XP_005651229
JGI: 2628
UniProt: I0Z7R6
LinkDB
AA seq 513 aa
LAIANEDFFGNASFRPNQLEAINATIKGNDCFVLMPTGGGKSLCYQLPALLTNGVTVVIS
PLVSLIQDQVFHLQQAGIACGYLSGTQDYEDSRSIMQRLQQTPPDIRVLFVTPEKVARSD
YLMRTLDVLHSRRLLDRVAVDEAHCVSQWGHDFRPDYKGLSVFKRRYPMVPLLALTATAT
PRVQHDVVQQLSLKHCVVFRSSFNRQNLRYGKFDDAIKEMEDRIARNFCHHGRVQCGIVY
CLSRNDCEKVAAELQEYSRGCVFHYHAALTQQEREEVQANWTHDRMQIIVATIAFGMGIN
KPDVRFVMHFSVPKSLEGYHQETGRGGRDGKVATCILYYSYADAVRMRHMLKQSAEEQNT
SPAQLQCNMDSLNHMIAYCEEQVECRRSVLLAHFGESFDVKRCHGTCDVCASRNGQEFEQ
RDLTAEALAVVRLVRAVKQHGSLSHVVDVFRGANTKAVKDRGHAQLPDHGAGKALSKNEA
LRLLRKMVVVGVLSEETFRADNQYGGVMSHLSV
NT seq 1539 nt   +upstreamnt  +downstreamnt
cttgccatcgccaatgaggacttcttcggcaatgccagcttcagacccaaccagttggag
gccatcaatgccaccataaaaggcaatgactgctttgtgctcatgccgactggaggaggc
aaaagtctctgctaccagctaccagcgctgctgaccaacggtgtgaccgtggtcataagt
cctctggtgtctctcatccaagaccaggtgtttcacttgcagcaggctggcatcgcctgc
ggctacctcagtggcacacaggactacgaggattcgcgcagcatcatgcagaggctgcag
cagactcccccagacatcagagtcctgtttgtgacccctgagaaggtcgcccgcagcgac
tacctgatgcgcacactcgacgtactgcacagccgcaggctcttggaccgggtagcagtg
gatgaggcgcattgtgtcagccagtggggacacgacttccggcccgattacaaaggcctg
tccgtcttcaaacgcagatacccaatggtgcccctgcttgcactgacagccacagcaact
ccccgagtgcagcatgatgtggtgcagcagctctccctgaagcactgcgtcgtgttcaga
tccagcttcaatcgccagaacctgcggtatggcaagtttgatgacgccattaaggagatg
gaggacaggattgcgcgcaacttctgccaccacggcagagtgcagtgtgggattgtctac
tgcctgtccaggaatgactgcgagaaggtggctgcagaactgcaggagtactcaagagga
tgcgtcttccactaccatgcagccttgacgcagcaggagagggaggaggtgcaggcaaac
tggacgcacgaccgcatgcagatcatcgtcgccaccatcgcctttggaatgggcatcaac
aagccggatgtgcgctttgtgatgcacttctccgtgccaaaatcgctggaaggctatcac
caggagacggggcgcggcgggcgtgatggcaaggtggcgacatgcatcctgtactacagc
tacgcggacgccgtgcgcatgcgccacatgctcaagcagagcgcagaggagcaaaacacg
tccccggcgcagctgcagtgcaacatggactccctcaaccacatgatcgcctactgtgag
gagcaagtggagtgccgtcgctcggtgctgctggcgcactttggcgagtcctttgatgtc
aagcgctgccacggcacctgcgacgtctgcgcatcgcgcaatggccaggaattcgagcag
cgcgatctgacggcggaggcgctggcggtggtgcgtctggtgcgtgcggtgaagcagcac
ggcagcctgagccatgtggtggacgtgttccggggcgccaatacgaaggccgtcaaggac
cgcggccacgcgcagctgcccgaccacggcgccggcaaggccctcagcaagaacgaggca
ctgcggctgctgcgcaagatggtggtggtgggcgtgctgtccgaggagaccttccgcgct
gacaaccagtacgggggcgtcatgtcgcacctctccgtc

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