KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_26393
Entry
COCSUDRAFT_26393  CDS       T02914                                 
Name
(RefSeq) Rab8/RabE-family small GTPase
  KO
K07901  Ras-related protein Rab-8A
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:csl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    COCSUDRAFT_26393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csl04131]
    COCSUDRAFT_26393
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_26393
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csl04147]
    COCSUDRAFT_26393
   04031 GTP-binding proteins [BR:csl04031]
    COCSUDRAFT_26393
Membrane trafficking [BR:csl04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    COCSUDRAFT_26393
 Autophagy
  Other autophagy associated proteins
    COCSUDRAFT_26393
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    COCSUDRAFT_26393
Exosome [BR:csl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCSUDRAFT_26393
  Exosomal proteins of other body fluids (saliva and urine)
   COCSUDRAFT_26393
  Exosomal proteins of colorectal cancer cells
   COCSUDRAFT_26393
GTP-binding proteins [BR:csl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    COCSUDRAFT_26393
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA CPT AAA_29 MCM FeoB_N AAA_16 AAA_22 AAA_5
Other DBs
NCBI-GeneID: 17036334
NCBI-ProteinID: XP_005642967
JGI: 26393
UniProt: I0YJ54
LinkDB
AA seq 210 aa
MSLRRQDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWI
KLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDNVNKV
LVGNKCDMDESKRRVPYSQGQALADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDS
QTDSPSAGSGSGNVHLSSTTASAKQSKGCC
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtctctacgtcggcaggactacgattatctgatcaagctcctgctcattggagacagc
ggtgttggcaagagctgcttgttgctgcggttctccgaggactctttcacgtcttccttc
atcaccacaattgggattgacttcaaaatcaagaaaatcctcattgacaacaagtggatc
aagcttcaaatatgggacacagctgggcaggagcgcttcaggacaatcaccagcgcatac
tacagaggagccatgggcatcctcctggtatacgatgtgaccgatgagtcatcattcaac
aacataaggaattggatgcggaacatcgagcagcatgcctctgataacgtcaacaaggtg
ctcgttgggaacaaatgtgacatggacgagagcaagaggcgagtaccgtactcgcagggg
caggcactcgcagacgagttcggcatccagttctttgagaccagcgcaaagagcaacatc
aaggtggacgaggtgttccagtccatcgccaaggatgtcatgcttagattgagggactcg
cagactgacagcccctctgccggatccggatcaggcaacgtccacctgagcagcaccact
gcttctgccaagcagtcaaagggctgctgctag

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