KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_26804
Entry
COCSUDRAFT_26804  CDS       T02914                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K14411  RNA-binding protein Musashi
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    COCSUDRAFT_26804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_26804
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     COCSUDRAFT_26804
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 PCDH15_12th
Other DBs
NCBI-GeneID: 17045593
NCBI-ProteinID: XP_005652122
JGI: 26804
UniProt: I0ZAA9
LinkDB
AA seq 412 aa
MLVHGERVISQQHQGQPQPPAQMHGGELSGMNGMSNGDGMMQSEVESRKLVILGLPWDTT
EASLEQHFSQFGPLQEVVIMKDRTTGKSRGFGFVTFFRAMDASCAASQEHVVDGRRCEAK
YALPRGGGPAPRTTRIFVARIPLSVNDAQFRQYFEQYGSVQDAYMPKDATKQSHRGIGFV
TFANADSVEAVMSSPHSMNGQELAIDRATPKDKPSDSAGNDFNPYQAVANGNGRTTAYSS
GGGSSSVVAAFEGANGGQAANSGGSGSGELFQPMRGDGASIDTRSGPRIFVGKLNKETTE
NDVKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFETDGAVLRIHAHGQHQIKGSVVAI
DSAVPRREEGTRTDDDVSTSSMQVMDLGGDDLSLGPARNHPQERMRHGYKPY
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgctggtgcacggcgaaagagtgatatcacagcagcaccaggggcagcctcagcctcct
gcacagatgcatggcggagagctgtccgggatgaatggaatgagtaacggtgacggcatg
atgcagagcgaagttgagtcacgcaagctggtgattctggggctgccctgggacaccaca
gaggcttccttggaacagcatttctcgcagttcggtccgcttcaggaagtggtgatcatg
aaggaccgtaccacagggaagtccaggggatttggctttgtcaccttctttcgggcaatg
gatgcatcctgcgcagcgagccaggagcatgtggttgatggcaggcggtgtgaggccaag
tatgccttgccgcggggaggcggcccggcgccaaggacaaccagaatattcgttgcaagg
ataccgttgtctgtcaacgatgcgcagttccggcagtactttgagcagtacggctctgtg
caggatgcgtacatgcccaaggatgccacaaagcagtcgcaccgaggcattggcttcgtc
acatttgccaatgcagactccgtggaggcagtgatgtcctcgccccacagcatgaatggg
caggagctggccattgacagggcaactcccaaggacaagccctccgactcggccgggaac
gatttcaacccgtatcaggccgtggcgaacggcaacggcaggacgaccgcgtacagcagc
ggcggcggcagcagcagcgtggtggcggcgtttgagggtgccaacggtgggcaggcggcc
aacagcggtgggtccggctccggggagctcttccagcccatgcgcggcgacggcgcctcc
atcgacacgcgctctgggccccgcatctttgtgggcaagctgaacaaggagacaacagag
aatgacgtgaaggagtacttcaccaggttcggttatgtgatggatgtgtatctgccgcgc
gacaaggtcaaccgctcggagcaccgcggctttggctttgtgacctttgagacggatggt
gcagtgctgcgcatccacgcccacggccagcaccagatcaaggggtcagtggtggcgata
gacagcgcggtgccgcggcgcgaggagggaacgcgcacggacgatgacgtgtccacctcc
agcatgcaagtgatggacctgggtggtgatgatctgagtctgggccctgcacgcaaccac
cctcaggagcgcatgcgccatggctacaagccttactga

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