KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_27367
Entry
COCSUDRAFT_27367  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_27367
Spliceosome [BR:csl03041]
 Complex C
  Other components
   Complex C specific factors
    COCSUDRAFT_27367
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_NWD2_C VPS11_N Beta-prop_Vps41 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Nup120_160 WD40_like Beta-prop_WDR19_1st Beta-prop_BBS7 Kelch_6 VID27 DUF7811
Other DBs
NCBI-GeneID: 17043659
NCBI-ProteinID: XP_005650191
JGI: 27367
UniProt: I0Z4S8
LinkDB
AA seq 304 aa
MSDADNDRETLPKEEIFCLKGHDGPVLAVRFNKAGTYCLSCGKDRSIRLWNPHRGLLIKT
YAGHGYDVRDAVVCADNSKFASCGGDRQIFLWDVGTGRTIRKLRGHDGVVNSVCLGPGEA
TLVTGGYDQSVRVWDMRSRSFDAIQTIKSFADSVTSVAVSANAEIMASSVDGTVRRFDVR
GGCAYVDQMHAAVTSMALSNDGNCVLASCLDARLRLLDKGSGELLAEYKGHKQESAKMDC
SLTPSDAHVLSGSEDGRVCYWDLVEETMVESFQAHSGVVCSLAMHPDGNLLLTSSTDGTV
KVWQ
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcagatgcagacaacgacagagagacacttccaaaggaggagatattctgcctgaaa
ggccatgatggtcctgtgcttgcggtcagattcaataaggctggcacctactgcctgtct
tgtgggaaggatcgttccatcagactttggaacccgcaccgaggactcctgatcaaaaca
tacgcaggtcatggctatgatgtcagggatgccgtcgtctgcgcagacaacagcaagttt
gcctcctgcggtggggaccggcagatatttctgtgggatgtggggactgggcggacgatc
aggaagctccgaggccacgatggcgtggtcaactcggtgtgcctgggcccaggggaggca
acgctggtgacagggggctatgatcagtcagtgcgcgtgtgggacatgcgctcccgctcc
tttgatgccatccagaccatcaagtcctttgctgactctgtcacgtctgtcgctgtctct
gccaacgcagagatcatggcgtccagcgtggatggcacggtgcggcgatttgacgtgcgc
ggcggctgcgcgtacgtggaccagatgcatgcagccgtgacttcgatggcgctttcgaat
gacggcaactgcgtgctggcttcctgtctggatgcgcggctgcggctgctggacaagggc
agtggcgaactgctggctgagtataaaggtcacaagcaagagtcagccaagatggactgc
tcgttgacgccatcagatgcgcatgtgctgagcggctctgaagacggccgggtgtgctac
tgggacttggtggaggagacaatggtggagtccttccaggcacacagcggcgttgtatgc
tctctagcaatgcaccctgacggcaatctgctgctcacatcatccacagatggcactgtc
aaagtttggcaatga

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