Coccomyxa subellipsoidea: COCSUDRAFT_27436
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Entry
COCSUDRAFT_27436 CDS
T02914
Name
(RefSeq) small rab-related GTPase
KO
K07887
Ras-related protein Rab-5A
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04144
Endocytosis
csl04145
Phagosome
csl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
COCSUDRAFT_27436
04145 Phagosome
COCSUDRAFT_27436
04148 Efferocytosis
COCSUDRAFT_27436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_27436
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_27436
04031 GTP-binding proteins [BR:
csl04031
]
COCSUDRAFT_27436
Membrane trafficking [BR:
csl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
COCSUDRAFT_27436
Endosome - Lysosome transport
COCSUDRAFT_27436
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCSUDRAFT_27436
Exosomal proteins of other body fluids (saliva and urine)
COCSUDRAFT_27436
Exosomal proteins of colorectal cancer cells
COCSUDRAFT_27436
Exosomal proteins of bladder cancer cells
COCSUDRAFT_27436
GTP-binding proteins [BR:
csl04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
COCSUDRAFT_27436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
SBP_bac_3
TsaE
AAA_24
AAA_16
Motif
Other DBs
NCBI-GeneID:
17043806
NCBI-ProteinID:
XP_005650346
JGI:
27436
UniProt:
I0Z583
LinkDB
All DBs
AA seq
199 aa
AA seq
DB search
MADVGSIQQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTKTIPEKGVKFEI
WDTAGQERYHSLAPMYYRGAAAAVVVFDITNAESFAKAKNWVKELQRQGNPNMIMALAGN
KADLAAQRAVTSEDAKAYADENSLFFWETSAKTNVNVAEVFHDIAERLPRASAAPQPPVG
GITLTETVPERAKKSACCS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtgggctcaattcagcaggctaagctcgtgttgctaggggatatgggagct
ggaaaatcatctttggttctcagattcgtcaagggccagttcttcgattaccaggaatca
acaatcggagcagcctttttgacaaaaacaatcccggaaaagggtgtcaaattcgagatt
tgggacacagcaggccaagaaagatatcacagcttggcgcctatgtactacaggggggct
gcagcagcagtggtggtctttgacatcaccaatgcagagagctttgccaaggccaagaac
tgggtgaaggagctgcagcggcagggcaaccccaacatgatcatggccttggccggcaac
aaagccgacctcgcagcgcagcgcgctgtcacctctgaggatgcaaaggcgtatgcggac
gagaacagcctcttcttctgggagacaagcgcgaagacgaacgtcaacgtggcagaggtg
ttccatgacattgccgagcggctgccgcgcgcgtcggcagcgccgcagccgccagtggga
ggcatcactcttactgagaccgtccccgagcgcgccaagaagtcagcctgctgctcctga
DBGET
integrated database retrieval system