Coccomyxa subellipsoidea: COCSUDRAFT_27692
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Entry
COCSUDRAFT_27692 CDS
T02914
Name
(RefSeq) vacuolar protein sorting-associated protein 16
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
COCSUDRAFT_27692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_27692
Membrane trafficking [BR:
csl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
COCSUDRAFT_27692
Hops complex
COCSUDRAFT_27692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
ANAPC4_WD40
AdoHcyase
Motif
Other DBs
NCBI-GeneID:
17044196
NCBI-ProteinID:
XP_005650736
JGI:
27692
UniProt:
I0Z6C3
LinkDB
All DBs
AA seq
859 aa
AA seq
DB search
MFAAAGEWEACGDRFYEKHELYTMAWSDVKLDQMRVACARYGGPIAMVRDDRKLVVVSGG
ITKPVVRIFTAAGETLAAFLWDHGRIAGMGWTNEEDLLIIEDGGEVHMYSMHGQKLPRSF
SLGAEVAAERVTDCVVYGDGLVALTGAHRLWTVSNLEEPRPQKLALSGLTEPPHCFAVIE
PRHTLSGCVEVLVAAGESVILVDADAANDAGLPNGPVTKLSVAPNGQFVAAFTGEGKLVV
WTADFGKFLSEFATQSDTPPEQVAWCGTDSVVLYWEDILLLVGPYGDWVKYSLEEPAVLM
TECDGVRLVSDTTHELLRRVPDCLADVYRVGSTAPGKCLLLLLAYLWALLYDARELFDQQ
NAKADEGLRSIVTSLPEAVATCVDAAQAELDEGRQVALMKAACYGRAFCAAEAFPRDRIV
TVCRQLRILNALRAPNVGLPLTAAQAEALAMPVVVSRLINARRHLLALRIATLLGMGPEK
VLVHWACTKVSAAADVPDAALRDAIAARLAGCPGARYATVAAHAQAVGRKGLAALLLEHE
TCAAEQVPLLLGLGEEERALGAALDSGDADLVYLVLFRMQRTLPLQQFLAVLAARPAARS
LFNAYCARTEPELLEQINMATGVYEGVAAMRVREALAASARLGRARAAAGGAGRAAEPAA
AEVVRLLDRASDLYAQTKEHGFQSRAAAEWARLRRVQAELEAETGNAALLGLSLADTLRQ
CVRLGNHRAAARLRADFKVSERRFWWLKLKTLAAAKDWEGLESFAREKKSPIGIEPFVAA
AKQHGAPDATVSRIIARLPDGKRKAEEYAAAGLLQEAAECAARVRDNDMLSKLQDMIGTV
SPLGVAVSQLKDRLQSGGR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgcagccggggagtgggaagcgtgcggcgatcgcttctacgagaagcacgag
ctctacaccatggcatggtcagacgtcaagctcgatcagatgagggtggcatgcgcgcgc
tatggcggccccatcgcgatggtgcgcgacgacaggaagctggtggtggtgtccgggggc
atcacaaagccggtggtcaggattttcacggcagcgggggaaacgctggcggcgtttctg
tgggaccatgggcgcatagctggcatggggtggaccaacgaggaggaccttctcatcatt
gaggatggcggcgaggtgcacatgtacagcatgcacgggcagaagctgccgcgcagcttc
tcgctgggcgctgaggtggcggccgagcgcgttacggactgcgtcgtctacggggatggc
ctggtggcgcttacgggcgcgcaccggctctggacggtgtctaacctggaggaaccccgg
cctcagaagcttgcgctgagcggactcacagagccgccgcactgctttgcagtgattgaa
ccgcggcacacgctcagcggctgcgtagaggttttggtggcggctggggagtcagtcata
ttggtggatgcagacgcggcaaacgatgcgggcctgcccaacgggccggtgaccaagctg
tcagtcgcgcccaacgggcagtttgtggctgctttcacgggcgagggcaagctggttgtg
tggactgctgactttggcaagttcctgtcggagtttgccacgcagtctgacacgccgcca
gagcaggttgcctggtgtggcacagactctgtcgtcctctattgggaggacatattgctg
ctggttgggccctatggcgactgggtgaagtacagtctggaggagcccgctgtgctgatg
accgaatgcgacggggtgaggctggtgagtgacaccacgcatgagctgctgcggcgggtg
ccggactgcctcgcggatgtctacagggttggatctaccgcaccaggcaaatgccttctt
cttttgcttgcctacctctgggcgttgctgtacgacgcgcgcgagctgttcgaccagcag
aacgccaaggcggacgaggggctgcgctcgattgtgacatctctgccggaggcggttgcc
acgtgtgttgacgctgcacaggctgagctggacgaggggcgccaggtggcgctcatgaag
gcggcatgctacggccgagcgttctgcgccgcggaggcgttcccgcgcgaccgcatagtc
accgtctgccgccagctgcgcatcctcaacgccctccgcgcgccaaacgtcggcctgccg
ctgacggccgcgcaggccgaggcgctcgcgatgccggtggtcgtgtcgcggctaatcaac
gcgcgccggcacctgctcgctctgcgcatcgccactctgctcggcatgggacccgagaag
gtgctggtgcactgggcgtgcaccaaggtgagcgcggcagcggacgtgccggacgcggcg
ctgcgggacgccatcgcggcgcggctggccggctgccccggggcgcgctacgccaccgtg
gccgcccacgcccaggccgtcggccgcaaggggctcgccgctctgctcctggagcacgag
acctgcgccgccgaacaggtgccgctgctgttaggcctgggagaggaggagcgggcgctc
ggagcagcgttagacagcggcgacgcggacctggtgtacctggtgctcttccgcatgcag
cgcactctgccgctgcagcagttcctggccgtcctagctgcacgcccggccgcgcgttcc
ctcttcaacgcctactgcgcgcgcacggagccggagctgctagagcagataaacatggcg
acgggcgtctacgagggagttgccgcaatgcgcgtgcgagaggcactggccgcctcggcc
cggctcggccgcgcgcgcgccgcggcgggcggtgccggccgggcggccgaaccggcagct
gcggaggttgtgcgattgcttgaccgcgcttctgacctctatgcccagacgaaggagcac
gggttccagtcgcgcgcggctgcggagtgggcgcggctgcggcgggtgcaggcggagctg
gaggcggagacagggaacgccgcgctgctgggcctgagcctcgcagatacactccggcag
tgcgtgcgcctcggcaaccaccgcgcggccgcccgcctgcgcgccgacttcaaagtctcc
gaacgccgcttctggtggctgaagttgaagacgctggcggcagcgaaggattgggagggg
ctggagtccttcgcgcgcgagaagaaatcgcccattggcattgagccctttgtggcagct
gccaagcagcatggcgcgcccgacgccaccgtctcccggataatagctcggctgccggac
gggaagcgcaaggcagaggagtacgcagcggcagggcttctacaggaggcggctgagtgc
gcggcgcgcgtcagagacaacgacatgctgagcaagctgcaggacatgatcggcaccgtc
agccccctgggggtcgcagtgagccagcttaaggaccggttgcagtctggcggcaggtga
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