KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_27927
Entry
COCSUDRAFT_27927  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K24725  angio-associated migratory cell protein
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:csl04990]
    COCSUDRAFT_27927
Domain-containing proteins not elsewhere classified [BR:csl04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   COCSUDRAFT_27927
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th eIF2A Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_IP5PC_F Kelch_6 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N DUF2844 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 17043301
NCBI-ProteinID: XP_005649843
JGI: 27927
UniProt: I0Z3T0
LinkDB
AA seq 395 aa
MSSDEEAEQFVGDEQTLHGDSQVVADLAGGDEAPIDDEDSDDDTSMPEEDHNAQDESVHA
FEGHTGAVFAVAWHPNSDLVATGGADDRVFLWQVGDDTGASTAELSGHTDTVASLRFNMS
GSLLASGGLDGHVGIWDTASGRCKHSLEGPGGAIDWVDWHPRGDIVVAGSDDFTAWLWNA
QTAACMQVFTGHSGPVRCGRFTPDGKLVVTGGGEYDASLRVWDPKSGTCLKTMQGQQFHP
VGLTALDVHADSTTAITGAEDGSACLTNIQSGRILGRLTGHTDSIEAAHMSAVMPYSATG
SVDGNLIIWDTATLSVRSTCQHPEAVVKLVLHPSQPLVYTACLDGVARCWDARTGTCTQQ
WTGHQEGIQDIAVSRDGNSVITGSDDNTARVFTLR
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtcgtcagatgaagaggcagagcaatttgtgggagacgaacaaactctgcacggcgac
agccaagttgtagcagaccttgcaggcggggatgaggctccaattgatgatgaggacagc
gacgatgatacgtcaatgcctgaagaagatcataatgcccaggatgagtcagtgcacgct
ttcgaaggacacacaggcgctgtatttgctgtagcatggcacccgaactctgacctcgtg
gcaactggcggtgcggatgacagagtgttcctttggcaggttggagatgatacaggggcc
tcaacagcagagctgagtggccatacagacacggtggcctcactccgcttcaatatgagt
ggcagtctcctagcttccggaggcctggacgggcatgttggaatctgggatacggcatca
ggcaggtgcaagcacagcctggaagggcccggtggagccattgactgggtggactggcac
cctcgtggggacattgttgtggcaggatcagatgacttcacagcttggctgtggaatgcc
cagacagcagcatgcatgcaggtgttcacagggcacagcgggccggtgagatgtggtcgt
ttcacaccagatgggaagctggtcgtgacagggggaggtgaatatgatgcaagtcttcgc
gtctgggaccccaagagtggaacatgcctcaagaccatgcaggggcagcagttccatcca
gtcgggctcactgcgctggatgtccatgcagactccacaactgccatcactggagcagaa
gacggctctgcctgtctgaccaacatccagtctggccgcattcttggcaggctgacaggt
cacacggactccattgaggcggcccacatgtcagcagtgatgccatacagtgcgacgggg
agcgtagatggcaaccttataatatgggacactgctactctgtccgtgcgatcaacttgc
caacacccagaggctgttgtgaagctggtgctccaccccagccagccccttgtgtacact
gcttgcctggacggagtggcgcgctgctgggatgcaagaacaggcacatgcacgcaacag
tggaccgggcatcaagagggcattcaagacattgctgtcagcagggacggtaattctgtt
atcacaggaagcgacgacaacactgctcgtgtgtttacactacgctga

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