Coccomyxa subellipsoidea: COCSUDRAFT_27927
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Entry
COCSUDRAFT_27927 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
KO
K24725
angio-associated migratory cell protein
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csl04990
]
COCSUDRAFT_27927
Domain-containing proteins not elsewhere classified [BR:
csl04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
COCSUDRAFT_27927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_IP5PC_F
Kelch_6
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
DUF2844
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
17043301
NCBI-ProteinID:
XP_005649843
JGI:
27927
UniProt:
I0Z3T0
LinkDB
All DBs
AA seq
395 aa
AA seq
DB search
MSSDEEAEQFVGDEQTLHGDSQVVADLAGGDEAPIDDEDSDDDTSMPEEDHNAQDESVHA
FEGHTGAVFAVAWHPNSDLVATGGADDRVFLWQVGDDTGASTAELSGHTDTVASLRFNMS
GSLLASGGLDGHVGIWDTASGRCKHSLEGPGGAIDWVDWHPRGDIVVAGSDDFTAWLWNA
QTAACMQVFTGHSGPVRCGRFTPDGKLVVTGGGEYDASLRVWDPKSGTCLKTMQGQQFHP
VGLTALDVHADSTTAITGAEDGSACLTNIQSGRILGRLTGHTDSIEAAHMSAVMPYSATG
SVDGNLIIWDTATLSVRSTCQHPEAVVKLVLHPSQPLVYTACLDGVARCWDARTGTCTQQ
WTGHQEGIQDIAVSRDGNSVITGSDDNTARVFTLR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagatgaagaggcagagcaatttgtgggagacgaacaaactctgcacggcgac
agccaagttgtagcagaccttgcaggcggggatgaggctccaattgatgatgaggacagc
gacgatgatacgtcaatgcctgaagaagatcataatgcccaggatgagtcagtgcacgct
ttcgaaggacacacaggcgctgtatttgctgtagcatggcacccgaactctgacctcgtg
gcaactggcggtgcggatgacagagtgttcctttggcaggttggagatgatacaggggcc
tcaacagcagagctgagtggccatacagacacggtggcctcactccgcttcaatatgagt
ggcagtctcctagcttccggaggcctggacgggcatgttggaatctgggatacggcatca
ggcaggtgcaagcacagcctggaagggcccggtggagccattgactgggtggactggcac
cctcgtggggacattgttgtggcaggatcagatgacttcacagcttggctgtggaatgcc
cagacagcagcatgcatgcaggtgttcacagggcacagcgggccggtgagatgtggtcgt
ttcacaccagatgggaagctggtcgtgacagggggaggtgaatatgatgcaagtcttcgc
gtctgggaccccaagagtggaacatgcctcaagaccatgcaggggcagcagttccatcca
gtcgggctcactgcgctggatgtccatgcagactccacaactgccatcactggagcagaa
gacggctctgcctgtctgaccaacatccagtctggccgcattcttggcaggctgacaggt
cacacggactccattgaggcggcccacatgtcagcagtgatgccatacagtgcgacgggg
agcgtagatggcaaccttataatatgggacactgctactctgtccgtgcgatcaacttgc
caacacccagaggctgttgtgaagctggtgctccaccccagccagccccttgtgtacact
gcttgcctggacggagtggcgcgctgctgggatgcaagaacaggcacatgcacgcaacag
tggaccgggcatcaagagggcattcaagacattgctgtcagcagggacggtaattctgtt
atcacaggaagcgacgacaacactgctcgtgtgtttacactacgctga
DBGET
integrated database retrieval system