Coccomyxa subellipsoidea: COCSUDRAFT_28027
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Entry
COCSUDRAFT_28027 CDS
T02914
Name
(RefSeq) Nop-domain-containing protein
KO
K14565
nucleolar protein 58
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSUDRAFT_28027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_28027
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
COCSUDRAFT_28027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
17043467
NCBI-ProteinID:
XP_005650009
JGI:
28027
UniProt:
I0Z496
LinkDB
All DBs
AA seq
554 aa
AA seq
DB search
MLLLFETAAGFALFKVLQENKIQETEDLWQDFQTLDAAQKVVKLKAFSKFESTIDALAAA
TALGDSKLSKDLKKFLKKNADGKTLGVADAKLGSIIKEKLGIPCIYSNGVQELTRGVRSQ
IEGLISGLAGGQDLTPMSLGLSHSLSRYKLKFSPDKVDTMIVQAIGLLDDLDKELNTYAM
RVREWYGWHFPEMTKIVTDNIVYAKVIKLMGTRENAVDKDFSGIPLEEEVEEELKETAVI
SMGTEISPVDLLNIISLCDQVIALAEYRAQLYEYLKSRMMAIAPNLTVLVGELVGARLIA
HAGSLINLAKAPASTVQILGAEKALFRALKTKHETPKYGLIFHASLIGQAAPKHKGKISR
VLAAKCALSIRVDALGDVADAHVGLESRAKVEARLRQLEGKMLASDSAKPRADKGSIPKY
DAARQGDAGPALITAAKAYNPDADVTADAGKEEKKRKKKKAAAAEAEAATAEPNGVAEAG
PSEAAPAAINGGEETGEKKKKKKKRSAEEAAPPDAAETAEPVKKKKKKDAAAVNGDAAPS
TEKKKKKKAKVEST
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcctattcgaaacggcagcaggtttcgcgctcttcaaagtactgcaggaaaac
aagatacaggagacagaggacttatggcaggattttcaaactctggacgcagcacagaag
gttgtgaaattgaaggcttttagtaagtttgaaagcaccatcgatgccctggcagcagca
actgctctgggagacagcaagctgagcaaagatctgaagaagttcttgaagaagaatgcg
gatgggaagacactcggagtggcagatgccaagctgggcagcatcatcaaggagaagctt
ggcatcccctgcatctacagcaatggggtgcaagagctgaccagaggcgtgcgcagtcag
attgagggcctcatcagtggtcttgctggcggccaggacttgactcccatgtctctgggt
ctcagtcacagcctgtcacggtacaagctgaagttcagcccagacaaggttgacaccatg
attgtgcaagccatcgggctgctggatgacctggacaaggagctgaacacatatgcgatg
cgggtgcgcgagtggtacggctggcattttccagagatgaccaagatcgtcacagacaac
attgtctacgccaaagtgatcaagctgatgggcacacgcgagaacgcagtggacaaggac
ttctcgggcatcccactggaggaagaagtggaagaggagctgaaggagacagcagtcatc
tccatgggcacagagatcagccctgttgacctgctcaacatcatctccctctgcgaccag
gtgattgcactggcagagtacagggcgcagctgtacgagtacctgaagagccggatgatg
gccatcgcccccaacctgacagtactggtgggagagctcgtcggcgcgcgcctcattgct
cacgctggctctttgatcaacctggccaaggcgcctgccagcacagtgcagatcctgggc
gcggagaaggccctcttcagagcgctcaagacaaagcacgagacgccaaagtatgggctc
atcttccacgccagcttgatagggcaggcggcgcccaagcacaagggcaagatcagtcgc
gtgctggccgcaaagtgcgccctctccattcgcgtggacgcgttaggagacgtcgcagat
gcacacgtgggtctggagagcagagcaaaggtggaggcgcggctgcgccagctggagggc
aagatgctggcatcggacagcgcaaagccgcgcgccgacaagggcagcatccccaagtac
gacgcggcgcggcagggggatgccggcccagcgctcatcaccgcggccaaggcatacaac
ccggacgctgacgtcaccgctgacgccggcaaggaggagaagaagcggaagaagaagaag
gcggctgccgcagaggcagaggcagccacggcagagcccaatggggttgcagaggccggt
ccctcagaggcagcccctgcagcaatcaacggcggggaggagacaggcgagaagaagaag
aaaaagaagaagaggagcgctgaggaggcagctccgccagatgctgcagagacagcagag
cctgtgaagaagaagaaaaagaaggatgctgcagcagtcaacggtgatgcagcgcccagc
actgagaaaaagaagaagaagaaggcaaaggtggagagcacctga
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