Coccomyxa subellipsoidea: COCSUDRAFT_28136
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Entry
COCSUDRAFT_28136 CDS
T02914
Name
(RefSeq) splicing factor, CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_28136
Spliceosome [BR:
csl03041
]
Common components
Common spliceosomal components
General mRNP proteins
COCSUDRAFT_28136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_10
RRM_7
RRM_Nup35
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
17043599
NCBI-ProteinID:
XP_005650141
JGI:
28136
UniProt:
I0Z4M8
LinkDB
All DBs
AA seq
497 aa
AA seq
DB search
MAEFDEYAYLEKQLEAKDANGHKDDGTHKREKREKKDRTRDRDSERERTRDQDRDRKSSK
REHRDKSPDRERKRHHSSHDHHRSERDRKHSSRPRSLEKRRERTPPEVREQREKERELKE
LDRDIRTVFAYNLPLKAEERDLFEFFSKAGPIEDVKIIMDRNTRKSKGFAYIEYTNKADI
VTAMALTGQILMGQAVMVKSSEAEKNLAWEAAQAQNASMLQMSTIGNAGTGPCKLYIGNL
HPNIQEQDLKQVFEAFGAVEYITLQKDPTGRSQGYGFVQYQTTPDATKAMQQLDGLDIAG
SQISVKIAPLTPAETAAAAAAAAGLDLDDAEGEHGGLKLTANARAALMQRLSGPTDLGVL
IADALGPLPGPPAMVPAGTVVMSAGAQALAMEQGILGPSSPIPTQCLLLKNMFDPKEETE
PDWDQEIATDVTEECSKYGPVSHTHVDKNSKGFVYLKFVTVEGSAAAQKALHGRWFAGRQ
VVAEFQFTQIYNSYFQT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtttgatgagtatgcatacttggagaagcaattagaagcaaaggacgcaaat
ggccacaaggacgacggaactcacaaacgtgagaagagggagaagaaggacaggactaga
gacagggacagcgaaagggagagaaccagggaccaagaccgggacaggaaatcttcaaag
cgtgagcacagggacaagtcacccgacagggagcgcaaacgtcaccattcctcacatgat
caccatcgatctgagcgcgacaggaagcacagcagtcggccgcgcagtttggagaagagg
agggaacgcactcccccagaggtgagagagcagcgggaaaaggagcgcgagctcaaggag
cttgatcgtgacatccgcacagtctttgcttacaacctgccactcaaggcagaggagcga
gacttgtttgagttcttctcaaaggcaggcccgattgaagatgtgaaaataatcatggac
cgcaacacaagaaagtccaagggatttgcatacattgagtacacgaacaaggcggacatt
gtgactgctatggcgctgactggccaaatactcatgggtcaggccgtgatggtgaaaagc
tcagaggcggagaagaatttggcatgggaggccgcccaagcccaaaacgcttccatgctg
cagatgagcaccatcggcaatgctggcacaggaccgtgcaaattgtatattgggaacttg
caccccaacattcaggagcaagacctgaagcaggtgtttgaggcttttggagctgtggaa
tacatcactctgcagaaggaccctactggacgttcgcagggatatggctttgtgcagtat
cagaccacaccagacgccacaaaggcgatgcagcagcttgatgggctggacattgccggg
agccagatctctgtgaagattgcccccttgacaccagcagagacggccgccgcggccgct
gctgctgccggcctggacctagatgacgctgagggtgaacatggtgggctgaagctgaca
gcaaatgctcgagcagcgctcatgcagaggttgtcaggtccgactgatttaggtgtgctc
attgcagatgctttgggtccgctgcctgggcctccagcgatggttccagcaggcacagtg
gtcatgtcagcaggtgctcaggccctggcaatggagcagggcatcttggggccttcctcg
cccatccccactcagtgcctcttgctaaagaacatgttcgatccgaaagaggagacggag
ccggactgggaccaggagatagcaacggatgtgacagaggaatgcagcaagtatggacca
gtgtcccacacacatgtggacaagaatagcaagggctttgtgtacctgaagtttgtaact
gttgaagggtcagctgcagctcagaaggccctccatggacgctggtttgctgggcgacaa
gtcgtagccgagttccaattcacgcagatatacaacagttattttcagacatga
DBGET
integrated database retrieval system
