Coccomyxa subellipsoidea: COCSUDRAFT_28437
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Entry
COCSUDRAFT_28437 CDS
T02914
Name
(RefSeq) glycoside hydrolase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00500
Starch and sucrose metabolism
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
COCSUDRAFT_28437
Enzymes [BR:
csl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
COCSUDRAFT_28437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
17042913
NCBI-ProteinID:
XP_005649456
JGI:
28437
UniProt:
I0Z2P3
LinkDB
All DBs
AA seq
493 aa
AA seq
DB search
MQVSGRALASGGCSCSTIPHQFGRQVLAFQTKARVQSKRVSAQRTVAASTPVATAEKKLK
KTASKVADTAKDVADKVVGVSKPDLSKVVLLQAFGWDSCDKGGWYKIVKEKIPDIKASGV
THVWLPPPSQSVSRQGYLPGQLYNLQSLYGSEEELKELLAALKEAGLVPVADIVINHRCA
DAQDENGVWNNFRDDVSHSGEKIDWGQWAITGNDPEFGGTGNPDTGDDYGPAPDLDHLNE
DLRSHLKDWLNHLKEDIGYEGWRFDFVKGYGPEFIKEYVLETVGEGTFNVGEYWVDLRWN
GAELDYNQNDARQTIVNWIDGAGGASAAFDFPTKGILQEAVKNCQYWRLRDENNKPPGVI
GYWPEQSVTFIDNHDTGSTQQHWPFPDSHVDLGYAYLFTHPGNPTIFWDHYFDNGYKGVI
DQLIELRKRAGITAGSNIEILAADHDFYVARINDNVTIKMGPRYDMGDLLPKEEDGWKFA
VSGTDFGIWEKTA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttcagggcgcgcgctcgcgtctgggggttgctcctgctccaccatcccgcac
caatttggcaggcaggtattggctttccaaacgaaggcacgggtccaatccaagcgggtg
tctgctcagcgcactgtggctgccagcaccccagtcgccaccgccgagaaaaagctgaag
aagacagcatcgaaggtagcagacacggccaaggatgtggcggataaggtcgtaggagtc
agcaagccagacctgagcaaggtggtgctcctacaagcattcggatgggacagctgcgac
aagggcggctggtacaaaatcgtgaaggagaagattcccgacatcaaggcatctggagtg
acgcatgtgtggctgccacccccgagccagtctgtgtctcgccaaggctacttgcctggg
cagctgtacaacctgcagagcctctatggcagcgaagaggagctgaaggagcttctggca
gccctgaaggaggccggtctggtcccagtggcagacattgtcatcaaccaccgctgcgct
gatgctcaggacgagaacggggtctggaacaacttcagggatgatgtcagccactctggg
gagaagattgactggggccaatgggccatcacaggcaacgacccagagtttggcggcact
ggcaatcccgacaccggcgatgactacggcccggcccccgatctggaccacctgaacgag
gacctgcgctcgcacctgaaggactggctgaaccacctgaaggaggacatcggctatgag
ggctggcgctttgactttgtcaagggctatggcccggagttcatcaaggaatacgtcctg
gagactgttggcgagggaactttcaatgttggcgagtactgggtcgacctcaggtggaac
ggcgctgaactggactacaaccagaacgacgcacggcagacaattgtcaactggatcgac
ggtgccggcggcgcgtcggccgcctttgatttcccgaccaagggaatcctgcaggaggct
gtcaagaactgccagtactggcgcctgcgcgatgagaacaacaagccgcccggagtcatc
ggctactggcctgagcagtccgtgaccttcattgacaaccacgacaccggcagcacgcag
cagcactggcccttccctgactcgcacgtggacctgggctatgcctacctgttcactcac
ccgggcaaccccaccatcttctgggaccactactttgacaacggctacaagggcgtaatc
gaccagctgatcgagctgcgcaagcgcgccggcatcacggcaggctccaacatcgagatc
ctggctgccgaccatgacttctacgtcgcgcgcatcaatgacaatgtcaccatcaagatg
ggcccccgctacgacatgggggacctgctgcccaaggaggaggatggctggaagtttgct
gtcagcgggacagactttggcatctgggagaagaccgcctga
DBGET
integrated database retrieval system