Coccomyxa subellipsoidea: COCSUDRAFT_29021
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Entry
COCSUDRAFT_29021 CDS
T02914
Name
(RefSeq) DNA/RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csl03029
]
COCSUDRAFT_29021
Enzymes [BR:
csl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCSUDRAFT_29021
Mitochondrial biogenesis [BR:
csl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
COCSUDRAFT_29021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
NAM-associated
Motif
Other DBs
NCBI-GeneID:
17041791
NCBI-ProteinID:
XP_005648343
JGI:
29021
UniProt:
I0YZI0
LinkDB
All DBs
AA seq
591 aa
AA seq
DB search
MLIPPLPWRSHDSGGHLIMRGSIMRVHTYPKGVSRAIETAQERTPYGLSRVYDALNAVGE
VPWAINKPMLAVVERAWAAQLPICGLPVKYVDQKPQPKSTAKRFRTHHHRHQLQLLLTSQ
ETGAERTKRMKGNRLLNKRIRETHSLRCDLNLKLGVANEFKDELRFYFPHNLDFRGRAYP
LHPHLNHMGPDVCRGLLTFAEARPLGPDGIGWLYVLIANSWGKSIDKMDFEGRRQFAQRN
LEAVLDSAERPLDGHRWWTKGEKPWQLLAACMEVRDALASGNPAAYLSRLPVQIDGSCNG
LQHYAALGRDKAGGSAVNLRPAPAPQDVYGEIAVEVNKMVAADAEKGVPEALALQGHINR
KLVKQTVMTSVYGVTYVGARQQIQNRLLERGWSNNDQLYRCASYAARLTLQGLEEKFDKA
VGIMRWLGQCASIVASQGNAVAWHTPLGLPVLQPYREKYKHVVQTVLQRLILMQDREGLP
VLRRRQKSAFPPNYVHSLDSTHMMMTALACKQAGIAFAGVHDSFWTHAGDTAVLARKLRE
TFVELHSQPLLAQLLSEMKVRYPELAQKFPPLPETGELDLNEVLDAEYFFG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcccgccgctgccctggcgctcgcatgactctggaggccacctgataatgcgc
ggaagcatcatgcgagtgcacacgtacccgaagggcgtcagccgcgcgatagagactgct
caagagcgcacgccttacggcctgtccagggtgtacgatgctctgaatgctgttggggag
gtgccttgggccatcaacaagccgatgctggctgttgttgagagggcgtgggctgcccag
ctgccgatctgcgggctgcccgtgaaatacgtcgaccagaagccccaacccaaatccact
gccaagagattccgcacccaccaccaccggcatcagctgcagctgctgctcacaagccag
gagacaggtgcagagaggaccaagcgcatgaaaggcaaccggcttctcaacaagcgcatc
cgggagacgcactctctgcgctgcgacctcaacctcaagctcggggtggcgaacgagttc
aaggatgagctcaggttttatttcccccacaacctcgatttcagggggcgcgcataccct
ctgcacccccacctcaaccacatgggcccggatgtgtgccgaggcctgctcacctttgca
gaggctcgtcccctcggtccagatggcatcggctggctctatgtgctgattgccaactcg
tggggcaagtccatcgacaaaatggacttcgaggggcgtcggcagtttgcgcagcgcaac
ttggaagccgtactggactctgcagagcggccgctggacggccacaggtggtggaccaag
ggggagaagccatggcagttgctggcagcttgcatggaggtgcgcgatgcgctggcgtct
ggaaatccggcggcgtacctatcgcggctgccggtgcagattgacggctcctgcaacggc
ctgcagcactacgccgcgcttggccgtgacaaggccggaggcagcgccgtcaacctgcga
cccgcgccagccccgcaggacgtgtatggagaaattgcggtagaggtgaataaaatggtg
gcggccgacgcggaaaagggcgtgccggaagcgctggcactgcaggggcacataaaccgc
aagctggtgaagcagacggtgatgacgagcgtgtatggagtcacctacgtcggagcgcgg
cagcaaatccaaaacaggctgctggagcgcggctggagcaacaacgaccagctctaccgc
tgcgccagctatgccgccagattgacgctacaggggctggaggagaagtttgacaaggcg
gtcggcattatgcgctggctcgggcagtgcgcgtcgattgtggccagccaagggaacgcc
gtcgcatggcacacacccctgggcctgccagtcttgcagccctaccgcgagaagtacaag
cacgtggtgcagacggtgctgcagcggctgatcctgatgcaggatcgggaggggctgccg
gtgctgaggaggcgtcagaagagcgcgttccctcccaattatgtccactccctcgactcc
acccacatgatgatgaccgccctcgcctgcaagcaagcaggcatcgcgtttgcgggagtg
catgactcgttctggacgcatgcgggggacactgcggtacttgcgcggaagctgcgcgag
accttcgtggagcttcactcgcagcccctcctggcgcagcttctcagcgagatgaaggtg
cggtatccggagctggcacagaagtttccacctcttccagagactggagagctcgatctc
aatgaggttctggacgctgagtatttcttcggctga
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