Coccomyxa subellipsoidea: COCSUDRAFT_29684 Help Entry COCSUDRAFT_29684  CDS       T02914                                  Name (RefSeq) putative TAF5   KO K03130   transcription initiation factor TFIID subunit 5 Organism csl  Coccomyxa subellipsoidea Pathway csl03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     COCSUDRAFT_29684  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csl03021]     COCSUDRAFT_29684    03036 Chromosome and associated proteins [BR:csl03036]     COCSUDRAFT_29684 Transcription machinery [BR:csl03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      COCSUDRAFT_29684    Coactivators     SAGA/TFTC/STAGA complex      COCSUDRAFT_29684 Chromosome and associated proteins [BR:csl03036]  Eukaryotic type   Histone modification proteins    HAT complexes     PCAF complex      COCSUDRAFT_29684     STAGA complex      COCSUDRAFT_29684     TFTC complex      COCSUDRAFT_29684     SAGA complex      COCSUDRAFT_29684     SLIK complex      COCSUDRAFT_29684 SSDB OrthologParalogGFIT Motif Pfam:  WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML DSE1_N Beta-prop_IFT140_1st Beta-prop_SCAP ASA1 Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 PAC11 Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF4 CFAP251_N Beta-prop_WDR41 PEP5_VPS11_N WDR54 Motif Other DBs NCBI-GeneID:  17040393 NCBI-ProteinID:  XP_005646951 JGI:  29684 UniProt:  I0YVI8 LinkDB All DBs AA seq 607 aa AA seqDB search MTLAPQPDPKKGLVKDLIYYLTAEEDPAKYTKSFDRLATWVDNSLDQYKPELRRILYPVF IHTFLELVERGAPGEAAQLMNRYKKQFGDNAAHPSKMRKQLDDLQGISQKPQIATNRTAQ AARSMRYPVKLSTYSFELLTHFMQAHRLALPLGIMNEHVNLQVVQGKPAKLEHEPEEEEV SLLTGHMQEDVSATNQKPLLLGLLRVMVEEKFEELQAAKESPDIPEVDEDGKPLTKKART ALLRAAEKEKEKRLSAASDRIEPQVPLPPMPEGLEAELLEDLESRISLSDAALPSAVFYT FVNTHQSLNCVSFSSDGAMIAGGFADSSVRVYDASKRAANGAKPQGDEAIVLRGHSRPVY GLDFSMDSRLLLSSSGDGTVRLWSTDLFANLVAYRGHTFPVWDVAMCGQGHYFASVSADR TARVWSTERAQPLRTLVGHHSDVSMARWHPNCHYVATGSHDRTVRLWDVRDGRSQRILVG HRAAITSLEFSSDGSTLYSGDEDGCMSAWDLSQAKRLHHVPAAHSGPVWSLATSHGSSAL LASGGADNTLRLWSVSGSPAGQDGQPSSASGLKQLQSYPTKATPVFAVKFTRRNLLLGSG ALTLRKK NT seq 1824 nt NT seq  +upstreamnt  +downstreamnt atgacgcttgcaccccagcctgatcctaagaagggtctagttaaagatctgatctactac ctcacagctgaagaggatcctgccaagtacaccaagagctttgaccgccttgctacctgg gtggacaattctttggaccaatacaagccggaactcaggcgaatcctatatcccgtcttc atccacacatttctggagctagtggaaaggggagcgcccggtgaggcagcgcagctcatg aaccggtacaagaagcagtttggggataatgctgcgcacccatccaagatgcgcaagcag ctggatgatctgcaaggcatctctcagaagccccagatcgccacgaaccgcacggcccag gcggctcgttccatgcgataccctgtgaagctcagcacatactccttcgagctgctgacc cacttcatgcaggcccacagacttgccctgccactgggcatcatgaatgaacatgtaaat ctgcaggtggtccaagggaagccagcaaaactggagcatgagccagaggaggaggaggtg tcattgctgactgggcacatgcaggaggacgtctccgccacaaaccagaagcctctgctg cttggcctcctcagggtcatggtggaggagaagtttgaggagctgcaagcggccaaagag agcccggacatcccagaggtcgacgaggacggcaagccgctgacgaagaaggcgcgcaca gccctgctgcgggccgcagagaaggagaaggagaagcgcctcagcgctgcctccgacagg atcgaaccccaggtgcctttgccgccgatgcctgagggattggaggcggagcttctggag gacctggaaagccgcatcagtctgtcggacgctgcgctgccgtcagcagtcttctacacg tttgtcaacacccaccagagtctcaactgcgtcagcttctcctccgatggcgccatgatt gctggcggctttgcggactcatcagtgcgggtgtacgatgcatcaaagcgtgcagcaaat ggagcaaaaccgcagggggatgaggcgatagtgctgcgtggccactccaggccagtctat ggtctggacttcagcatggacagccggctgctgctgtcttcttccggcgacggcactgtg cggctctggagcacagacctctttgcaaatctggttgcctacagggggcacacgttcccg gtgtgggacgtggcaatgtgtgggcaggggcactactttgcgagcgtgtcggcggaccgc acggcgcgcgtgtggagcacggagcgcgcgcagccgctgcgaacgctggtgggccaccac tcggacgtgtcgatggctcgctggcaccccaactgccactacgtggccactggctcccac gaccgcactgtgcgcctctgggacgtccgcgacggccgctcccagcgcatcctcgtcggc caccgcgctgccatcacgtctctggagttttcttctgacgggagcacgctgtactctggc gatgaggatggctgcatgtctgcctgggatctgtctcaggccaagcggctgcaccatgtg ccagcggcgcactccggcccagtctggtccctcgccaccagccacggcagcagcgctctg ctcgcatcaggtggtgcagacaacaccttgaggctgtggagcgtgagtggcagcccagct gggcaggatggccagcccagcagtgccagtggcttgaagcagctgcagtcttatcccacc aaggcaactcctgtgtttgctgtgaagtttactcggcgcaacctgctgttaggcagtggt gctctcactctgaggaagaagtag

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