KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_29908
Entry
COCSUDRAFT_29908  CDS       T02914                                 
Name
(RefSeq) ARM repeat-containing protein
  KO
K15436  transportin-3
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03013  Nucleocytoplasmic transport
csl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSUDRAFT_29908
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    COCSUDRAFT_29908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csl03016]
    COCSUDRAFT_29908
Transfer RNA biogenesis [BR:csl03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    COCSUDRAFT_29908
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th Xpo1 TPR_TNPO3_IPO13_2nd IBN_N TPR_TNPO3_IPO13_3rd Importin_rep IFRD
Other DBs
NCBI-GeneID: 17039972
NCBI-ProteinID: XP_005646531
JGI: 29908
UniProt: I0YUB8
LinkDB
AA seq 1004 aa
MSSSTDVAMSRQNVLDALHALNHHPDGNVKKQASTWLEQWQSSLDAWSVSDNILHDSSSS
LEAQYFCAQTLRTKVQRDFEELPQGAAASLRDSLVELLLRFGNGSPPVRTQLCLAVAALV
AHMPPQQWGPGGSLQWLVQRLSSDSQAAALPCLLELLTILPQEAGSYRPAVRPERRRQLI
QEMEAAIPTALQLLTTVLQQHTGPDVTLRVLVAFSEWLKLASASNLDGAALAQHPLVTAA
LDGLNSERTLDGAVDAVVELIYVSSSGGQPEDNMLPLVARLVPAVRALSPAPFEDGDDTE
TAKGMARLFAEVGEAYCGLIATGTQQALQPVEALLAVAAHPDNELAAMSFIFWHRLARHL
TSSFGAEPASNDELVRRVGVFTPAFEHLVALLRGRVRLPTDWDAWEQDDRDDFKHARQDV
GDALLDAAGVLGGERTLQLLTEPLAAVSEQVAAGGAFNWATAEAALYCVRAIHSNAPEPG
NALLLQLFSSLPQLPPVPQLQYTGAMLLAAYADWLAKTAGGGGIADLMPQLLQMLTTGLN
NKEAAKAAALALRHLCDACGAAMAPHLDVLMSLYQRIQSAGEASTSAAGPQSQAALQEND
VQQVVEALALVVSALPAEQRRAGLEALLSPIMAALHACLHQPPLPPANGHVLNGTAAPVA
LTGFEQATPLVDRMTIVFRYVGDPEGVAAALQRVWPLLSAIIEHLRGSTRATERIARCPR
YALRTAGKSAAVLLPTLTETLPRWFEATRHSSFLYVASELIKVFGSDPDLTAELGRLFER
LVGKACEQLRSLQDFIDDPDIADDAFLLAGRGLSYCPAIVLTSATLPRLLDAATAGVLVQ
HRHRPLHDPNTPPSITPFSITAAVVPRAPVLVRLLLAGAVGALPAPRSSDVADVLIALLK
ATHDQGVQWLKAAVDVIPDESATASDREQLLSAAVALAQGNNAAGSRCDPMGSHGSLLSA
HSVCASQADERPIDHVGISDECMCMHKQAGGACCRGAGRAGAAQ
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgagttcatccacagatgttgcaatgtcccgccagaacgtccttgatgccttacacgcc
ctcaaccatcacccggatggcaacgtaaagaagcaggccagcacctggttggaacagtgg
caatcctccttggatgcttggagcgtcagcgacaatatcctgcatgattccagctccagc
ttggaggctcagtacttctgtgcccagactctcagaacaaaggtgcagcgcgactttgag
gagctgccacagggcgcagcagccagcctgcgcgactcgctggtggagctgctgctgcga
tttggcaatgggtcgcctcctgtgcgcacgcagctgtgcctggcggtggctgcgcttgtg
gcgcacatgccgccgcagcagtggggccctggcggcagcctgcagtggctcgtgcagcgc
ctgagcagcgactcccaggcggccgcgctgccctgcctgctcgagcttctcaccatcctg
ccgcaggaggccggcagctatcggccggcggtgcgccccgagcggaggcgtcagcttatc
caggagatggaggccgccatccccaccgcgctgcagctgcttaccaccgtcctccagcag
cacacagggccggacgtgacgctgcgagtgctggtggctttcagcgagtggctgaagctg
gccagcgccagtaatctagacggggcggccctggcgcagcacccgctggtgaccgcggca
ctggacggactaaactcggagcgcacattggacggcgcagtggacgctgttgtggagcta
atctatgtcagcagctccggagggcagcccgaggacaacatgctgccgctcgtcgcgcgc
cttgtgcccgcggtgcgtgctctttcacctgcgccttttgaggacggggacgacacagag
acggccaagggcatggcgcgcctcttcgcggaggtcggcgaggcctactgcggcctcatc
gccacaggcacccaacaggcgctgcaaccggtggaggcgctgttggcggtggctgcgcac
ccggacaacgagctggcagcaatgtcattcatcttctggcaccgccttgcgcgccacctc
acctcctccttcggcgcagagcctgctagcaacgacgagctggtgcggcgcgtgggtgtg
ttcacaccggcgtttgagcacctggtggcgctgctgcgcgggcgagtgcgcttgccgacc
gactgggacgcctgggagcaggacgaccgcgacgactttaagcatgcgcgccaggacgtg
ggggacgctctcctagacgctgcaggtgtgctgggcggcgagcggacgctgcagctgttg
acggagccgctggctgcggtgagcgagcaggtcgccgcggggggcgccttcaactgggcc
accgccgaggccgccctgtactgcgtgcgcgccatccacagcaatgcgccggagccgggg
aacgcgctgcttctacagcttttcagcagcctgccgcagctgccgcccgtgccgcagctg
cagtacacgggcgccatgctgctggccgcctacgctgactggctcgccaagactgctggc
ggtgggggcatcgccgacctcatgccccagctgctccagatgctcaccacaggcctgaac
aacaaggaggcggccaaggcagctgcgctggcgctgcgccacctgtgcgacgcatgtggc
gcggccatggcgccccacctggacgtgctcatgtccctgtaccagcgcatccagtcggcc
ggcgaagcctccacctccgccgctggccctcaaagccaggccgccctgcaggagaacgat
gtgcagcaggtggtggaggcactggctctggtggtgtccgcgctgcctgcagagcagcgc
agggcgggcttggaagcgctgctgtcgcccatcatggcggctctgcacgcatgcctgcac
cagcccccgctgccgccggccaatggccatgtcttgaacggcacagccgcgccggtcgcc
ctcaccggcttcgagcaggccacgccgctggtcgaccgcatgaccatcgtcttcaggtac
gtgggcgacccggagggcgtggctgcggcgctgcagcgcgtgtggccgctgctgagcgcc
atcatcgagcacctgcgcggctccacgcgcgccacagaacgcatcgcccgctgcccccgc
tacgcactccgcaccgcaggcaagtcggcggctgtgctgctgccgacgctgacggagacg
ctgccgcgctggtttgaggcgacgcggcacagcagcttcctgtacgtggcctccgagctc
atcaaggtctttggcagcgaccccgacctcaccgcggaactcgggaggctgtttgagcgg
ctggtgggcaaggcgtgcgagcagctgcgcagcctgcaggacttcatcgacgaccccgac
atagcggacgacgcctttctgctggccggccgcgggctgtcctactgccccgccatcgtg
ctcacgtccgccaccctcccccgcctcctcgatgctgccaccgccggcgtcctcgtccag
cacaggcaccgccctctgcatgaccccaacacacctccaagcatcaccccattctcaatc
acagcggcagtcgtccccagagctcctgtcctggtcaggctgctgctggcaggcgcggtt
ggagcgctgcccgcacccagatcctcggacgttgctgatgtcctcatcgccttgctgaag
gccacgcatgaccagggcgtgcagtggctgaaggcagctgtggatgtgatcccggacgag
tctgccaccgcctcagaccgcgagcagctcctgagcgcagctgttgcgctggcccagggc
aacaatgctgcgggtagcaggtgcgatccaatgggatcccacggcagccttctgtcagca
cactctgtatgtgcaagtcaggctgatgagcgtccaatcgatcatgttgggatctctgat
gagtgcatgtgtatgcacaagcaggccggtggggcatgctgtagaggagctggcagagct
ggtgcggcgcaatag

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