Coccomyxa subellipsoidea: COCSUDRAFT_31120
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Entry
COCSUDRAFT_31120 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSUDRAFT_31120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_31120
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_31120
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
COCSUDRAFT_31120
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
COCSUDRAFT_31120
RSF complex
COCSUDRAFT_31120
WICH complex
COCSUDRAFT_31120
B-WICH complex
COCSUDRAFT_31120
NORC complex
COCSUDRAFT_31120
BRF complex
COCSUDRAFT_31120
NuRF complex (fruit fly)
COCSUDRAFT_31120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
17037745
NCBI-ProteinID:
XP_005644317
JGI:
31120
UniProt:
I0YN04
LinkDB
All DBs
AA seq
697 aa
AA seq
DB search
MVDGHPVLRSNNYDLESGERSVFEMELNREPWSSDAEVKVRVERPMSLKREMPFVVRKPH
KQINAAEQVRHEHNTSIRSAASAMEGRRAQFFNRHMAVLAPFITPRAVNAIREKAAAHDA
SKDAVPEAVEAQPECVVGTMREYQVEGLRWLVSRVGDSGVNSILADEMGLGKTLQTIAFL
AYMQTVRRVAGPSLVVVPMSVLSSWTKEFARWAPHLRVVRVHTSSPEDKLRIRREVLANP
SSFDVAVTTYDMMSSKDLGNSLSRTIAWRYLVLDEGHKIKNELTQVAQRMRHVSCQNIVL
LTGTPLQNNLHELYALLNFMHPDIFTTSDPFDQAFDLTKNRVDNDALEAAHRLIQPICLR
RLKEDVEKSLPARVETRIHCPLSSMQTFWYRRLLLKDSAMLKSLETEVTKEDAGNDAWKK
LQALFMQLRKCCNHPYLFPGAEPDFDGSQTGEHPSSRNKWEDIVEASGKMAVLDRMLAML
HARGHRVTLFSQFNIMLDIIEDYMIMRGYKYVRLDGSTSRVQRMIDINRFNIPGSNLFIY
ILNTKAGGLGVNLQSADTCILFDSDWNPQWDLQAMARVHRIGQTRTCHVYRFCTSGTIEQ
RVQQRAEKKLFLDQMVNSGHTESVEELEKLSKGEMLSMLKFGADRIFASEEGQAPTDKEL
AAIIDRSVSLGQSGVRACLHCTCQLGLRRNRNLACML
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgggcatcctgtgctgaggtcaaacaactatgatctggagagcggggagcgg
tctgtgtttgagatggagctaaacagggagccatggtcgtcggatgcagaagtgaaggtc
agagtggagaggcccatgtcgttgaagcgcgagatgccattcgtagttcggaagccgcac
aagcagataaacgctgcagagcaggtgcggcacgagcacaataccagcatccgctcggct
gcgtcggccatggagggccgccgtgcgcagttcttcaaccgccacatggccgtgctggcg
cccttcataacaccgcgtgcagtcaacgccatacgggagaaggcggcggcgcacgacgca
agcaaggatgcagtgccggaggcggtggaggcgcagccagagtgcgtggtgggcaccatg
cgcgagtaccaggtggagggcctgcgctggcttgtctcgcgcgtcggcgactccggcgtc
aactccatcctcgctgatgaaatggggctggggaagacgctgcagacgatagcgttcctg
gcttacatgcagacggtgcggcgcgtggcggggccctcgctggtggtggtgcccatgtcc
gtcctgtccagctggactaaagagtttgcacgatgggcgccccacctgcgcgtcgtgcgc
gtgcacaccagctccccagaggacaagctgcgcatccgccgagaggtgctggcgaatccc
tcatcctttgacgtggcggtgaccacctatgacatgatgagcagcaaggacctggggaac
tccttgagccggaccattgcctggcgctacctggtgctcgacgaaggccacaagatcaaa
aacgagctgacccaggtcgcgcagaggatgcgccatgtcagctgccagaacatagtgctg
ctgacgggaacgccgctgcagaataacctgcatgagctgtacgcgctgctcaacttcatg
caccccgacatcttcaccacctccgaccccttcgaccaggccttcgacctcaccaagaac
agggtggacaatgacgcgctggaagcagcgcaccggctgattcagcctatctgcctgcgg
cgcctgaaggaggatgtggagaagagcttgccggccagggtggagacgcgcattcattgt
ccgctgtcgtccatgcagaccttctggtaccgccgcctgctgctcaaggacagcgccatg
ctcaagagcctggagaccgaggtcacaaaggaagacgctggcaatgacgcgtggaagaag
ctgcaggcgctcttcatgcagctgcgcaagtgctgcaaccacccctacctcttcccgggc
gcagagcccgactttgacggctcccagacaggcgagcacccctcctcacgcaacaaatgg
gaggacatagttgaggcgagcggcaagatggcggtgctggaccgaatgctggccatgctg
cacgcgcggggacaccgcgtgacgctgttcagccaattcaacatcatgctggacatcatc
gaggactacatgatcatgcgcggctacaagtatgtgcggctggacggcagcacgtcgcgc
gtgcagcgcatgatagacatcaaccgcttcaacattcccggctccaatttgttcatctac
atcctcaacacaaaggcgggcggcctgggtgtcaacctgcaatccgccgacacctgcatc
ctcttcgactccgactggaacccccagtgggacctgcaggcgatggcgcgcgtgcaccgc
atagggcagaccaggacgtgccacgtctaccgcttctgcacgtccggcaccatcgagcag
cgcgtgcagcagcgcgccgagaagaagctcttcctcgaccagatggtcaactccggccac
accgagagcgtggaggagctggagaagctgagcaagggggagatgctctccatgctcaag
tttggcgcggaccgaatctttgccagcgaggaggggcaggcgcccaccgacaaggagctg
gccgccatcatcgaccgctccgtcagcctcggccagtcaggtgtgcgggcatgcctgcac
tgcacgtgtcagttggggctgcggcgcaaccgaaatttagcatgcatgctgtga
DBGET
integrated database retrieval system
