Coccomyxa subellipsoidea: COCSUDRAFT_31152
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Entry
COCSUDRAFT_31152 CDS
T02914
Name
(RefSeq) RNA-binding domain-containing protein
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_31152
Spliceosome [BR:
csl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
COCSUDRAFT_31152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
17037370
NCBI-ProteinID:
XP_005643800
JGI:
31152
UniProt:
I0YLI7
LinkDB
All DBs
AA seq
443 aa
AA seq
DB search
MSEQPVHRFSQPPSKVLHIRNLPYETTEEELRELCSNFGPIVQTKLNVGTNKNQAFVEFP
DMNMAIQMVSYFANAADPAKVRGKTVYLQYSTRQEIVNSTRSAEQGGNVLLVSLENLAPD
MNVTLDTLHLVFSAFGLVQKIATFEKGQGFQALVQYADAETAEQVRLALDGRHIPKHLLN
DTPNPPSLKITYSQHTDLNVKFQSHRSRDYTNLYLPAAPAGGDPNLALGIQAPISGNPLE
GNVLLCQIENQAYPVNVDALNTVFSPYGFVQKIAIFDKNGQSQALIQYPDPLSATNAKSA
LEGHAIYDGGYNRLKISYSVHRNLNVKANNDRSCDYTLQPGAPQAATPDHSYQQVPPSPP
ASPLAPVFVSVLCQHTRTRRCLPDRTLLTHPALTTSPQVGALLKSVISECHSAFCILHCL
FTFLVMRNVLFNTELQMDNSRNC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcagcctgtccataggttctcccagccaccgtcaaaggtgctccacatacga
aatttgccctacgaaactacagaagaagagctgagagaactatgttccaactttggcccc
attgtgcaaaccaagctcaatgtgggcacaaacaagaaccaggcctttgtggagttccct
gacatgaacatggccatccaaatggtctcctactttgcaaacgccgcagatccagccaag
gttcgcggcaagacagtgtacctgcagtacagcacgcggcaggaaattgtaaactccact
cgcagcgcagagcagggaggcaatgtcctgcttgtgtccctggaaaacttggcgccggac
atgaatgtgacgctggacacgctgcacctggtcttctctgcatttggcctggtgcagaag
atcgccacctttgagaagggccaggggttccaggcactcgtgcagtacgctgatgctgag
acagcagagcaggtgcggctggcgctggacgggcgccacatccccaagcacctgctgaac
gacacgcccaacccaccctccctcaagatcacctactcccaacacaccgacctcaacgtc
aagttccagtcccaccgatccagggactacactaacctgtacctgccggcggcgccagct
ggcggcgacccaaacttggcgctcggtatccaggcccccatcagcggcaaccctcttgag
ggaaatgtgctgttgtgccagatcgagaaccaggcctacccggtcaatgtggatgcgctg
aatacggtgttctctccctacggctttgtgcagaagatcgccatctttgacaagaacgga
cagagccaggcgctgattcagtacccggacccgctcagcgccaccaatgccaagagcgca
ctggagggccacgccatctatgacggcggctataacaggttgaagatcagctacagcgtg
caccgcaacctcaatgtgaaggccaacaacgaccgcagctgcgactacacgctgcagcct
ggcgccccccaggccgccacccccgaccacagctaccagcaggttccccccagtcccccc
gcgtccccacttgcgccggtctttgtttctgtgctgtgtcagcatacaagaacacgccga
tgtctgcctgataggacattgctgacacaccccgcactgacaacatcaccgcaagttggg
gcgttgcttaagtctgtgatcagtgaatgtcattcggctttttgtattctgcactgtctc
ttcactttccttgtcatgcgaaatgtccttttcaacacggagcttcaaatggacaactcg
cgtaattgctga
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