KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_31716
Entry
COCSUDRAFT_31716  CDS       T02914                                 
Name
(RefSeq) DNA repair protein rada
  KO
K04485  DNA repair protein RadA/Sms
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_31716
DNA repair and recombination proteins [BR:csl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     COCSUDRAFT_31716
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI Lon_C AAA_16 AAA_22 AAA DnaB_C NTPase_1 AAA_29 nSTAND_NTPase5 DUF7129 Isochorismatase AAA_18 SLFN-g3_helicase Zn_ribbon_8 DAP3
Other DBs
NCBI-GeneID: 17036482
NCBI-ProteinID: XP_005643141
JGI: 31716
UniProt: I0YJM8
LinkDB
AA seq 594 aa
MKALLSNRGALSNILKKASWLGGPQDQGVLRALNQRPRTRPPFSTKGLTFASSFVKRAFT
YKCTECGEQSPQWKGRCPSCSGWNTLEKAEVLRETAKSSGGGGGGGAVAAAAAAAVRPLG
ERIRNAAPTISRPRTGWVSSVSQRPQRLSEVGRNGYGSQWRIPLRGANGAELARVLGGGV
VPGSLTLVGGDPGVGKSTLLLQVAAMLGPEPAIGGSDEEDADEEGPPPAGEAVLYVSAEE
SVEQVGSRAERMGLRGAKHLFLYSATRLVEVLQEIVAMQPRAVIIDSIQTVYLDDVTGSA
GSVSQVRECATALLHVAKRQGVPVFLVGHVTKAGDIAGPRVLEHIVDTVVYMEGERHQAF
RLVRGIKNRYGPTDEVGVFQMEESGLQAVANPSALFLSDRQMARNASSAVTVAMEGTRPL
LMEVQALTSPVHQGPPLRMPNGIHRNRLSLIMAVLTKHVRLRLHSVDCHTNVVGGLTLTE
PATDLAVALAVASSYFERPIAQNIAVIGEIGLGGELRPANHIERRVVEAAKLGFTTVIVP
ATRAPTATGRLAGVNIIPCRTIKDALEAALGPSVTQNRAPHFEQQEEEENGFLG
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgaaagctcttttatcaaataggggtgcactgtcgaacattctgaagaaggcgtcctgg
cttggtgggccacaagatcaaggtgttctacgtgctctcaatcaaagaccacgaacacga
ccaccattcagcaccaaaggcctgaccttcgcaagctcctttgtcaagcgggcatttacg
tacaaatgcaccgagtgtggcgagcagtccccacagtggaaggggaggtgtccctcatgc
tcgggttggaacacgcttgagaaggcggaggtcctcagggagacagcaaagagcagtggc
ggcggagggggtggaggtgcggttgcagctgcagcagccgctgctgtgcgccctctagga
gagcggatccgcaacgcagcgcccaccatcagcagaccccgaactggctgggtgtccagc
gtcagccaaaggccgcagagactgagcgaggtgggcaggaatgggtatggaagccagtgg
aggatacctctccggggagcaaatggcgcagagctggcacgggttctcgggggcggcgtc
gtgcctggcagcctcactctcgtgggaggagacccaggtgtcgggaagagcaccctgctg
cttcaagtggcagcaatgctggggccggagcccgcaattggcgggtcagatgaggaggac
gcagatgaggagggccctccaccggcaggcgaggcggtgctgtacgtctctgcagaggag
agcgtggaacaggtgggcagcagggcggagcgtatggggctgcggggggcgaagcacctg
tttctctacagcgcaacacggctggtggaagttctgcaggagatcgtggccatgcagccg
cgcgcggtcatcatcgactccatacagaccgtgtacctcgatgatgtcaccggctctgct
ggcagcgtcagccaggtgagggagtgtgcaacagcgctgctgcatgtggcgaagcggcag
ggcgtcccggtcttcctggtcggccacgtcaccaaggctggcgacatagcgggcccgcgc
gtgctggagcacatagtggacacggtggtgtacatggagggcgagcgccaccaagccttc
cgcctcgtcaggggcatcaagaaccgctacgggcccactgacgaggtgggtgtgtttcag
atggaggagagcgggctgcaggcagtggccaacccaagcgcgctgtttctgagtgatcgc
cagatggcgcgcaatgccagctcagcggtgactgtggccatggagggaacgcggccgctg
ctcatggaggtccaggcactcacctcacccgtgcaccaggggccgcctctgcgcatgcca
aacggcatccaccgcaaccggctgagcctcatcatggcagtgctgactaagcatgtgcgg
ctgcggctgcactccgtggactgccacaccaacgttgtggggggcctcaccctcacagag
cctgccaccgacctagctgtcgctctcgccgtcgcatcctcctacttcgagcgccccatc
gcgcagaacattgctgtcatcggcgagattgggctgggaggcgagctgcggccggcgaat
cacatagagcggcgagtggtggaggcggccaaattgggcttcaccactgtcatagtccct
gcgactcgcgcaccaactgccactgggaggctggctggggtgaatataattccatgcagg
accatcaaggatgccctggaggctgccttggggccctctgtgacccagaaccgggcaccc
cattttgagcaacaggaagaggaggaaaatggcttcctgggatga

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