Coccomyxa subellipsoidea: COCSUDRAFT_31716
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Entry
COCSUDRAFT_31716 CDS
T02914
Name
(RefSeq) DNA repair protein rada
KO
K04485
DNA repair protein RadA/Sms
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_31716
DNA repair and recombination proteins [BR:
csl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COCSUDRAFT_31716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
AAA_22
AAA
DnaB_C
NTPase_1
AAA_29
nSTAND_NTPase5
DUF7129
Isochorismatase
AAA_18
SLFN-g3_helicase
Zn_ribbon_8
DAP3
Motif
Other DBs
NCBI-GeneID:
17036482
NCBI-ProteinID:
XP_005643141
JGI:
31716
UniProt:
I0YJM8
LinkDB
All DBs
AA seq
594 aa
AA seq
DB search
MKALLSNRGALSNILKKASWLGGPQDQGVLRALNQRPRTRPPFSTKGLTFASSFVKRAFT
YKCTECGEQSPQWKGRCPSCSGWNTLEKAEVLRETAKSSGGGGGGGAVAAAAAAAVRPLG
ERIRNAAPTISRPRTGWVSSVSQRPQRLSEVGRNGYGSQWRIPLRGANGAELARVLGGGV
VPGSLTLVGGDPGVGKSTLLLQVAAMLGPEPAIGGSDEEDADEEGPPPAGEAVLYVSAEE
SVEQVGSRAERMGLRGAKHLFLYSATRLVEVLQEIVAMQPRAVIIDSIQTVYLDDVTGSA
GSVSQVRECATALLHVAKRQGVPVFLVGHVTKAGDIAGPRVLEHIVDTVVYMEGERHQAF
RLVRGIKNRYGPTDEVGVFQMEESGLQAVANPSALFLSDRQMARNASSAVTVAMEGTRPL
LMEVQALTSPVHQGPPLRMPNGIHRNRLSLIMAVLTKHVRLRLHSVDCHTNVVGGLTLTE
PATDLAVALAVASSYFERPIAQNIAVIGEIGLGGELRPANHIERRVVEAAKLGFTTVIVP
ATRAPTATGRLAGVNIIPCRTIKDALEAALGPSVTQNRAPHFEQQEEEENGFLG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcttttatcaaataggggtgcactgtcgaacattctgaagaaggcgtcctgg
cttggtgggccacaagatcaaggtgttctacgtgctctcaatcaaagaccacgaacacga
ccaccattcagcaccaaaggcctgaccttcgcaagctcctttgtcaagcgggcatttacg
tacaaatgcaccgagtgtggcgagcagtccccacagtggaaggggaggtgtccctcatgc
tcgggttggaacacgcttgagaaggcggaggtcctcagggagacagcaaagagcagtggc
ggcggagggggtggaggtgcggttgcagctgcagcagccgctgctgtgcgccctctagga
gagcggatccgcaacgcagcgcccaccatcagcagaccccgaactggctgggtgtccagc
gtcagccaaaggccgcagagactgagcgaggtgggcaggaatgggtatggaagccagtgg
aggatacctctccggggagcaaatggcgcagagctggcacgggttctcgggggcggcgtc
gtgcctggcagcctcactctcgtgggaggagacccaggtgtcgggaagagcaccctgctg
cttcaagtggcagcaatgctggggccggagcccgcaattggcgggtcagatgaggaggac
gcagatgaggagggccctccaccggcaggcgaggcggtgctgtacgtctctgcagaggag
agcgtggaacaggtgggcagcagggcggagcgtatggggctgcggggggcgaagcacctg
tttctctacagcgcaacacggctggtggaagttctgcaggagatcgtggccatgcagccg
cgcgcggtcatcatcgactccatacagaccgtgtacctcgatgatgtcaccggctctgct
ggcagcgtcagccaggtgagggagtgtgcaacagcgctgctgcatgtggcgaagcggcag
ggcgtcccggtcttcctggtcggccacgtcaccaaggctggcgacatagcgggcccgcgc
gtgctggagcacatagtggacacggtggtgtacatggagggcgagcgccaccaagccttc
cgcctcgtcaggggcatcaagaaccgctacgggcccactgacgaggtgggtgtgtttcag
atggaggagagcgggctgcaggcagtggccaacccaagcgcgctgtttctgagtgatcgc
cagatggcgcgcaatgccagctcagcggtgactgtggccatggagggaacgcggccgctg
ctcatggaggtccaggcactcacctcacccgtgcaccaggggccgcctctgcgcatgcca
aacggcatccaccgcaaccggctgagcctcatcatggcagtgctgactaagcatgtgcgg
ctgcggctgcactccgtggactgccacaccaacgttgtggggggcctcaccctcacagag
cctgccaccgacctagctgtcgctctcgccgtcgcatcctcctacttcgagcgccccatc
gcgcagaacattgctgtcatcggcgagattgggctgggaggcgagctgcggccggcgaat
cacatagagcggcgagtggtggaggcggccaaattgggcttcaccactgtcatagtccct
gcgactcgcgcaccaactgccactgggaggctggctggggtgaatataattccatgcagg
accatcaaggatgccctggaggctgccttggggccctctgtgacccagaaccgggcaccc
cattttgagcaacaggaagaggaggaaaatggcttcctgggatga
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