Coccomyxa subellipsoidea: COCSUDRAFT_32572
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Entry
COCSUDRAFT_32572 CDS
T02914
Name
(RefSeq) Qc-snare protein, Syn8/Syntaxin8-family
KO
K08503
syntaxin of plants SYP5
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSUDRAFT_32572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_32572
Membrane trafficking [BR:
csl04131
]
SNARE
SNAP-25[C] (Qc)
STX8
COCSUDRAFT_32572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
KxDL
Motif
Other DBs
NCBI-GeneID:
17043175
NCBI-ProteinID:
XP_005649717
JGI:
32572
UniProt:
I0Z3F4
LinkDB
All DBs
AA seq
236 aa
AA seq
DB search
MAGTDRWTNEYDDAKQLADDTLALIQERNLKFPHGGQEASRVTATARRKLGTLGAAVDSM
RSSLESSALENITENERNRRRDLVNALKSRREQMLQSLRRDQNSANRTALMEMNRPKAPA
SETLQTADLDNRGILQLQDQSMRQQDAELEELERTVTSTKHIALTVNEELDLHRRLLDDL
DEDVEVTHSRMRTAQKKLKHVLARSGNCRSMCVTMLLMIALAVVVIIGFKLAAFFR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcagggacagatcgttggacaaacgagtatgatgatgccaagcagctggcagacgac
acacttgcccttatacaggagagaaatctcaagttcccacatggagggcaggaggcctct
cgcgtcacagctacagcgcgcagaaagcttgggacactgggtgctgctgttgacagcatg
agaagctctctggaaagctccgcccttgaaaacataactgaaaacgagaggaatcggcgg
cgggatctggtcaacgccctgaagtcaagacgggagcagatgctgcaatccctcaggcgg
gaccagaactcagcaaacaggactgcactgatggagatgaacaggccgaaggcgcctgca
tcggagacgctgcagacggcagatctggacaaccggggcattctgcagctgcaggaccag
tccatgcgccagcaggacgctgagctggaggaactggagcgcacagtcaccagcaccaag
cacatagcgctgacggtgaatgaggagcttgacctgcaccggcggctgctggatgacctg
gacgaggacgtggaggtgactcatagccgcatgcgcaccgcccagaagaagctcaagcac
gtgctagcccgctccggcaactgccgctccatgtgtgtcaccatgttactcatgatcgcc
cttgccgtggtagtcatcatcggcttcaagctggccgccttcttcagatga
DBGET
integrated database retrieval system
