Coccomyxa subellipsoidea: COCSUDRAFT_33287
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Entry
COCSUDRAFT_33287 CDS
T02914
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCSUDRAFT_33287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_33287
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_33287
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
COCSUDRAFT_33287
RNA polymerase I system
COCSUDRAFT_33287
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
COCSUDRAFT_33287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
17041210
NCBI-ProteinID:
XP_005647766
JGI:
33287
UniProt:
I0YXV3
LinkDB
All DBs
AA seq
115 aa
AA seq
DB search
MSVDNHAEVPTDFGKNLCACISCHLVKTLDQFAGGGCENCGFLGMEGDKDRCLECTTVAF
QGMVSVIDPASSWCAKWLHLSKLVPGCYALSVQVEVPPDIKELMAENGRRVLEVG
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgacaaccatgcggaagtgcccacagactttgggaagaatctttgcgcgtgc
atctcctgtcaccttgtgaagacacttgatcaatttgcagggggcggatgcgagaactgt
ggtttccttggaatggagggtgacaaggaccgctgcttggagtgcacaacagtggccttt
cagggcatggtgtctgtcattgacccagcttcgtcatggtgtgccaaatggctccatctc
tcaaagttggtgccaggctgttatgcgctgtccgtgcaagtggaggtgccgcctgacata
aaggagctcatggcagagaacgggagaagagtgctagaggtagggtaa
DBGET
integrated database retrieval system
