KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_34768
Entry
COCSUDRAFT_34768  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03420  Nucleotide excision repair
csl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_34768
   03460 Fanconi anemia pathway
    COCSUDRAFT_34768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csl03032]
    COCSUDRAFT_34768
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_34768
DNA replication proteins [BR:csl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    COCSUDRAFT_34768
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     COCSUDRAFT_34768
SSDB
Motif
Pfam: ERCC4 VMAP-M0 T6SS-SciN
Other DBs
NCBI-GeneID: 17045336
NCBI-ProteinID: XP_005651865
JGI: 34768
UniProt: I0Z9K2
LinkDB
AA seq 851 aa
MPVEVTNEMPAAARAELYRTQSCLFITTRILVVDLLTNRLQAHQVAGLLVMNAHTVTDMS
GEGFAVRLFRQGNQGGFVRAISDQPHAFAAGFSKLEKVMKALYVRKLFIWPRFEAHVKDT
LNDLPIEVIELAQEMTPPMVAIYDSITDLLDVCIKHLKRSNKIDTSDFSLEECLFRSFDE
IVRRQLDSVWHTITPQTKQVVNNLRTLRTLAEYLLCFDAVTFLSYLENLRAGESVNSVWL
FQEAAHTIFDQAKKRVYELQQASRNAAAAKNGKRKRAVSKDIADAGASSEAVEVVPTLEP
LPKWELVKEIVQARTCQQLRDVLQSDVQPVMQQLFNDYLLTRLDARKTAGKGKSGGGGTE
SASAGGGGRGGRGQGRFGRGRGSDRLDAVRAARTRNNPKEEQALLDEARALAATAAAKDK
AADAEAAGKDGYRGESPQPQAAPGSAADGESAQGNREQASEDDQGQPPGQGAADSPMLQG
VKFHALESRNDAVLWDVQPSFVVMVDSDVAFVRQLEVYAAGRGKAPLRVYNLRYKDSFEQ
DRYMAALQREQRVFEDLIHSKGHMVLPELGQDLALLRAEPREGVLQPGVEEAIPGMVPAA
NAITRRGGMMQPKSRQPRKLVVDVREFMSSLPSVLHQQHMEVIPVTLEVGDYVLSPEMCV
ERKSLSDLRQSFLSGRLFHQAESMSKHYKTPILLIEFERDKAFALHATSEIGSDINSNTL
GSKLVLLSLHFPRLRIIWSRSLHATADLFRSLKANQDEPDAAVAALVGVPVGADGLPAGG
GSESVVNTAAIDVLRRLPGVTEANFRPLMAAAGSLAGLAELPLEKLAEVMGSQASARKLR
DWLDAICPIQR
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgccagtggaggtgaccaatgagatgccggcagcagccagggcggagctgtacaggact
cagagctgcttgtttatcacaacccgcatcctggtggtggacctgctcaccaaccggctg
caggctcatcaggtggccggcctgctggtaatgaatgcgcacacggtgactgacatgtcc
ggggagggctttgccgtgcgcctcttccggcagggcaaccagggtggctttgtcagggcc
atttcagaccagccgcatgcctttgctgcaggcttcagcaagctggagaaggttatgaag
gctctgtatgtgcgcaaactcttcatctggccacgctttgaagcccacgtgaaggacact
ctgaatgatctgccgattgaggtgatagagctggcacaggagatgacacctccaatggtg
gctatttatgacagcatcactgatctgctagatgtgtgcataaagcacctgaagcggtcc
aacaagattgacacaagcgacttttcccttgaggagtgtctcttccgcagctttgacgag
attgtgcgccgccagctggactctgtctggcacaccatcacccctcagacaaagcaggtt
gtcaataatcttcgcacactgcggacgctggcagagtacctgctgtgctttgacgccgtg
accttcctgtcttaccttgaaaatctgagagcgggagagagcgtcaactctgtgtggctc
tttcaagaggcagcccacaccatttttgaccaagcaaagaagcgagtatatgagctgcag
caagcatccaggaatgcagcagcggccaagaacggcaagcgcaagagggctgtgagtaaa
gacatagctgatgctggcgcaagcagcgaagctgtggaagtggtgcccacgctggagccc
ttgcccaaatgggagcttgtcaaagagatcgtgcaggcgcggacatgccagcagctgcgg
gacgtgctgcagtcagacgtccagcccgtcatgcagcagctcttcaatgactacctgctg
acgcgcctggacgcacgcaagacagccggcaaaggaaagtccggcggcggcggcactgaa
tctgcgtctgccgggggcggcggccgcggcggcaggggtcaaggccgatttgggcgtggc
agaggcagcgacaggttggatgcggtgcgagcggcgcgcacaagaaacaatccgaaggag
gagcaggctctgctggacgaggcgcgcgcgcttgcggccacggcagccgccaaggacaag
gcggccgatgctgaagcagcagggaaggatggctatcgtggggaatctccgcaacctcag
gcggccccaggcagcgctgctgatggcgaatctgcccagggcaacagagagcaagcttca
gaggacgaccaaggccagccacctgggcagggcgcagctgacagcccgatgctgcagggc
gtgaagttccacgcgctggagagcaggaatgacgccgtgctttgggacgtgcagccatcc
ttcgtggtcatggtggactctgatgtggcctttgtacgccagctggaggtgtatgcggca
ggcaggggcaaggcgccgctgcgggtgtacaacctgcgctacaaggacagctttgagcag
gaccgctacatggcggcgctgcagcgggagcagcgcgtcttcgaggacctcatccactcc
aagggccacatggtcctgccagagctcggccaggacctggcactgttgagggcggagccg
agggagggagtcctgcagccgggggtggaggaggccatcccgggcatggtgccggctgcc
aacgcgatcacgcgccgcgggggcatgatgcagcccaagagccggcagccgcgcaagctg
gttgtggatgtgcgcgagttcatgagctcgctgccctccgtgctgcaccagcagcacatg
gaggttatcccagttaccctcgaggtgggggactatgtgctgtcgccggagatgtgtgtg
gagcgaaagtcgctgtccgatctgcggcagtcattcctgtcggggcggctattccatcag
gcggagtctatgtccaagcactacaagacgcccatcctgctcatcgagttcgagcgcgac
aaggcctttgcgctgcacgccacctctgagatcggcagtgacatcaatagcaacactctg
ggcagcaagctggtgctgctgtcgctgcacttcccgcgcctgcgcataatctggagccga
tccctgcacgccaccgccgacctcttccgttccctcaaggccaaccaggacgagcccgac
gctgcagtagccgcccttgtgggggtgccggtgggcgcggatgggctgccagcaggggga
ggctcagagtcggtggtgaacacagccgcaatcgatgtgctgcggcggctgccaggagtg
acagaggccaacttccggccgctcatggcggctgccgggagcctggccggcctggcagag
ctgccgctggagaagctggcggaagtcatgggcagccaggcatctgcgcggaagctgcgc
gactggctggatgccatctgccccatccagcggtga

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