Coccomyxa subellipsoidea: COCSUDRAFT_34803
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Entry
COCSUDRAFT_34803 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_34803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_34803
Enzymes [BR:
csl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
COCSUDRAFT_34803
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
COCSUDRAFT_34803
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
COCSUDRAFT_34803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DNA_ligase_A_M
DSPc
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
17045407
NCBI-ProteinID:
XP_005651936
JGI:
34803
UniProt:
I0Z9S3
LinkDB
All DBs
AA seq
530 aa
AA seq
DB search
MPPGLELPSGWIDCPPMGHRITPLMVVPVPLGHRFSRVLSDEEHFSPVKLMEQLHAKGVE
VGLLIDLTNTWRYYERDEIDALGVEHLKVCTPGNPFVPEPEAVNTFVWELMSYYHRANAR
WAVLHCTHGFNRTGSSGCQHLVRSMSVERALRIFAEHRPPGIYKEDYIRELYKYNHEPLP
SGFQAPKLPAWKPEEPDSPKADHILDSALVHGIEHEVPAAQLRFPGGQPVSLDRANLGKL
REKRYWVTWKADGTRYMLLLCKWGVYLIDRSFNVRRVQMRFPVQLVGKDGQLQAHHMTLL
DGEMLVDEDIAAGTQTRRFLAYDLIALHGKSLSNLPSKERWARMEEKVMRPRRKERDGIR
DPKIPYPVRYDYGSELFSVRRKEFWPLSRMSTLLDQFIPSLPHEADGLIFQGYDEEYVAG
TDFNLLKWKFAHLNSVDFRLRSTAAGARVVFDEGMDVTRLENCIVECSWDGEEGVWRYMR
VRSDKDTPNAYHVYEKVMQSIHDNITEEDLQEEIKIYFAGHRAADESPFL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaggcctagagctgcccagcggctggatagattgcccacccatggggcacaga
ataacaccgctgatggtggttccagtccctcttggccacaggttttcgcgcgtgctcagt
gacgaagaacacttctccccggtgaagctgatggaacagctgcacgccaaaggcgtggag
gtggggcttctgatagaccttacaaacacctggaggtactatgaaagggatgagattgat
gcgctgggagtggagcacttgaaggtctgcacccctgggaacccctttgttcctgagcca
gaggccgtcaacacctttgtgtgggagctcatgagttactaccaccgagcaaacgccaga
tgggctgtcttgcattgtacgcatggcttcaatcgcacaggtagttctggttgccaacac
cttgtgcgaagcatgtcagtggagagggcgctcagaatctttgcagagcacagaccaccg
ggtatctacaaggaagactacatacgggaactgtacaaatacaaccatgaaccactgcct
tcaggattccaagcccctaagttgccggcgtggaaaccagaagaacccgactcacccaag
gccgaccatatccttgatagtgcgcttgtgcatgggattgagcacgaggtgccggcggcg
cagctgcggttcccgggcggccagccggtgagcctggaccgcgcgaatctggggaagctg
cgcgaaaagcgctattgggtgacctggaaggctgacggcacgcgctacatgctgctgctg
tgcaagtggggcgtctacctcattgaccgctccttcaacgtgcgccgagtccagatgcga
ttcccggtgcagctggtgggcaaggacggtcagctgcaggcgcaccacatgactctgctg
gatggagagatgctggtagatgaggacattgcggccggcacgcagacgcgcaggttcctg
gcctatgacctcatcgccctccacggcaaatccctctccaacctcccctccaaggagcgg
tgggcgcgcatggaagagaaggtgatgcggcctcggcggaaggagcgcgatgggatacgg
gaccccaagatcccgtatccggtgcgctatgattacggatcggagctgttcagcgtgcgg
cggaaagagttctggcccctgtcgcgcatgtccacgctgctggaccagttcatccccagc
ctgccccacgaagccgacggcctcatcttccaggggtacgatgaggagtatgtggccggc
acggacttcaatctgctcaagtggaagttcgcgcacctcaactctgttgacttccgcctg
cgctccacagccgcaggtgcgcgagtggtattcgacgagggcatggacgtgacgcggctt
gagaactgcatcgtggagtgctcgtgggacggggaggagggcgtctggcgctacatgcgc
gtgcgcagcgacaaggacactccaaacgcgtaccatgtgtacgagaaggtcatgcagtcg
atccacgacaacatcaccgaggaagacctgcaagaggaaatcaagatatattttgccggt
catcgggcagccgatgaatcccccttcttgtga
DBGET
integrated database retrieval system