Coccomyxa subellipsoidea: COCSUDRAFT_34894
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Entry
COCSUDRAFT_34894 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCSUDRAFT_34894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_34894
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_34894
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
COCSUDRAFT_34894
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
COCSUDRAFT_34894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Nudix_hydro
Motif
Other DBs
NCBI-GeneID:
17045609
NCBI-ProteinID:
XP_005652138
JGI:
34894
UniProt:
I0ZAC5
LinkDB
All DBs
AA seq
735 aa
AA seq
DB search
MGLGKTVQLAVFLAGLHHSGRFRPSIIVCPATVLRQWLRELRLWYPPFRVIVLHESQRSG
NAPRPSRQKLVQLVKNSQAGILLTSYDQLRLQRSELLAVNWGYAILDEGHKIRNPDAEIT
LVAKQLATVHRIIMSGSPIQNHLTELWSLFDFVFPGKLGTLPVFRAQFALPIQIGGYANA
SAMQVSTAFKCAVVLRDLIAPYLLRRRKADVAQQLPKKTEQVLFCSLTTDQRDLYRSYLA
SDEVQDILNDRRNALAGIDILRKICNHPDLLQRRQWESTEKYGDPVRSGKLVVALKVLQH
WKQQGHKALFFTQTQQMLDIVERAVQAAGFRYHRMDGSTAVGARARLVDDFNGNEQVFVF
LLTTKVGGLGINLTGADRVLLYDPDWNPSTDMQARERAWRIGQKREVTIYRLITSGTIEE
KVYHRQIYKQFLTEKVLQDPKQKRFFKSKDIHDLFTLGDQYAGASETAHIFSSLHGGLEV
PLDPDSVAVPAEAAGPAGEVDDAKILRDLFEGTGVMSALDHSKIEGANNPEALNIDAQAA
RIARRAAAALRQSRAACVTAPVNQPTWTGRSGGSGAPRFGATSNQRLARGALSEPGSSEA
APADAGAGEVRRGTAGLARFGGGQAGTTGGLAPSSSVLLARLRERQAAVSAAASSAARND
PEVEEAHELSQRIVAYLEEAGGQADSHAVIQHFAPSLPAAKAPLFRQLLQQVASLRRNPS
AGKIWVLRPDFVTDR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgggcaagacggtgcagctggcggtgtttttggcgggcctgcaccacagcggc
cgcttccggccctccatcatcgtgtgccctgccaccgtgttgcgccagtggctgcgtgag
ctgcgcctgtggtacccgcccttccgcgtcatagtcctgcatgagtcccagcgctccggc
aacgccccccggccctcccgccagaagctggtgcagctggtgaagaacagtcaggccggc
atccttctgacgtcgtacgaccagctgcggctgcagcgctcagagctgctggccgtcaac
tggggctacgccattctggacgaaggccacaagatccgcaacccagacgccgagataaca
ctggtggcaaagcagctggcgacggtgcaccgcatcatcatgtcggggtcgccgatccag
aatcacctgacggagctgtggagcctgttcgactttgtgttccccggcaagctgggtacg
ctgccggtcttccgcgcgcagtttgcactgcccatccagattggcggctacgccaatgcc
tccgccatgcaggtgtcgacggcgttcaagtgcgcggtggtgctgcgggacttgatcgcg
ccatacctgctgcggcggcgcaaggctgatgtggcgcagcagctgcccaagaagacggag
caggtgctgttttgctcgctgaccaccgaccagcgcgacctctaccgctcctacctcgcc
tccgacgaagtccaggacatcctcaatgaccggcgcaatgctctggcaggcatcgacatc
ctgcgcaagatctgcaaccacccagacctgctgcagcggcgccagtgggagagtactgag
aagtatggggaccccgtccgctccggcaaactcgttgttgccctcaaggtgctgcagcac
tggaagcagcagggccacaaggcgctgttcttcacgcagacgcagcagatgctggacatc
gtcgagcgcgctgtgcaggccgcaggcttcaggtatcacaggatggatggctccacagcg
gtgggggcgcgtgctcggctggtggacgatttcaacggcaacgagcaggtctttgtgttc
ctgctgaccaccaaggtcggcggcctcggcatcaacctcaccggcgccgacagggtgctg
ctgtatgacccagactggaacccgagcacggacatgcaggcgcgggagcgggcgtggcgc
atcgggcagaagcgcgaggtgaccatctaccgcctgatcaccagcggcaccatcgaggag
aaggtctaccaccgccagatctacaaacagttcctcaccgaaaaggtgctgcaggaccca
aagcagaagcgcttcttcaagagcaaggacatccacgacctcttcacgctgggcgaccag
tacgcgggcgcctctgagaccgcccacatcttctcctccctccacggcggcctcgaagtg
cccctcgaccccgattcggtcgccgtccccgctgaggcagccggccctgcaggcgaggtg
gatgacgcgaagatactgagggatttgttcgaggggacgggagtgatgagcgcgctggac
cactccaagatcgagggcgccaacaaccccgaggctctcaacatcgatgcacaggccgcc
cgcatcgcccgccgcgccgctgccgcgctgcgccagtcacgcgccgcctgcgtgactgcg
ccggtcaaccagccgacgtggacaggcaggtccggcggcagcggggcgccgcgcttcggg
gcgacgtccaaccagcggctggcgcgcggcgccttgtccgagcccggcagctcggaggcg
gccccggccgacgctggtgccggcgaggtgcgtcggggcaccgccgggctcgcccgattt
ggcggcggccaggccggcaccacgggcgggctcgcgccgagcagctccgtgcttctggcg
cggctgcgcgagcggcaggcggccgtcagtgcagccgcctcgtccgccgcgcgcaacgac
cctgaggttgaggaggcgcacgagctgagtcagcgcattgtggcgtacctggaggaggca
ggcggccaggcggacagccatgcggtcattcagcatttcgcgccgagcctgcctgcagcc
aaagccccgctcttccggcagctcctgcagcaggtggccagcctgcggcgcaatccgtct
gctggcaagatatgggtgctgcgtcctgattttgtgacggatcggtga
DBGET
integrated database retrieval system