KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_34894
Entry
COCSUDRAFT_34894  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K10841  DNA excision repair protein ERCC-6
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_34894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_34894
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_34894
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    COCSUDRAFT_34894
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      COCSUDRAFT_34894
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII Nudix_hydro
Other DBs
NCBI-GeneID: 17045609
NCBI-ProteinID: XP_005652138
JGI: 34894
UniProt: I0ZAC5
LinkDB
AA seq 735 aa
MGLGKTVQLAVFLAGLHHSGRFRPSIIVCPATVLRQWLRELRLWYPPFRVIVLHESQRSG
NAPRPSRQKLVQLVKNSQAGILLTSYDQLRLQRSELLAVNWGYAILDEGHKIRNPDAEIT
LVAKQLATVHRIIMSGSPIQNHLTELWSLFDFVFPGKLGTLPVFRAQFALPIQIGGYANA
SAMQVSTAFKCAVVLRDLIAPYLLRRRKADVAQQLPKKTEQVLFCSLTTDQRDLYRSYLA
SDEVQDILNDRRNALAGIDILRKICNHPDLLQRRQWESTEKYGDPVRSGKLVVALKVLQH
WKQQGHKALFFTQTQQMLDIVERAVQAAGFRYHRMDGSTAVGARARLVDDFNGNEQVFVF
LLTTKVGGLGINLTGADRVLLYDPDWNPSTDMQARERAWRIGQKREVTIYRLITSGTIEE
KVYHRQIYKQFLTEKVLQDPKQKRFFKSKDIHDLFTLGDQYAGASETAHIFSSLHGGLEV
PLDPDSVAVPAEAAGPAGEVDDAKILRDLFEGTGVMSALDHSKIEGANNPEALNIDAQAA
RIARRAAAALRQSRAACVTAPVNQPTWTGRSGGSGAPRFGATSNQRLARGALSEPGSSEA
APADAGAGEVRRGTAGLARFGGGQAGTTGGLAPSSSVLLARLRERQAAVSAAASSAARND
PEVEEAHELSQRIVAYLEEAGGQADSHAVIQHFAPSLPAAKAPLFRQLLQQVASLRRNPS
AGKIWVLRPDFVTDR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgggcctgggcaagacggtgcagctggcggtgtttttggcgggcctgcaccacagcggc
cgcttccggccctccatcatcgtgtgccctgccaccgtgttgcgccagtggctgcgtgag
ctgcgcctgtggtacccgcccttccgcgtcatagtcctgcatgagtcccagcgctccggc
aacgccccccggccctcccgccagaagctggtgcagctggtgaagaacagtcaggccggc
atccttctgacgtcgtacgaccagctgcggctgcagcgctcagagctgctggccgtcaac
tggggctacgccattctggacgaaggccacaagatccgcaacccagacgccgagataaca
ctggtggcaaagcagctggcgacggtgcaccgcatcatcatgtcggggtcgccgatccag
aatcacctgacggagctgtggagcctgttcgactttgtgttccccggcaagctgggtacg
ctgccggtcttccgcgcgcagtttgcactgcccatccagattggcggctacgccaatgcc
tccgccatgcaggtgtcgacggcgttcaagtgcgcggtggtgctgcgggacttgatcgcg
ccatacctgctgcggcggcgcaaggctgatgtggcgcagcagctgcccaagaagacggag
caggtgctgttttgctcgctgaccaccgaccagcgcgacctctaccgctcctacctcgcc
tccgacgaagtccaggacatcctcaatgaccggcgcaatgctctggcaggcatcgacatc
ctgcgcaagatctgcaaccacccagacctgctgcagcggcgccagtgggagagtactgag
aagtatggggaccccgtccgctccggcaaactcgttgttgccctcaaggtgctgcagcac
tggaagcagcagggccacaaggcgctgttcttcacgcagacgcagcagatgctggacatc
gtcgagcgcgctgtgcaggccgcaggcttcaggtatcacaggatggatggctccacagcg
gtgggggcgcgtgctcggctggtggacgatttcaacggcaacgagcaggtctttgtgttc
ctgctgaccaccaaggtcggcggcctcggcatcaacctcaccggcgccgacagggtgctg
ctgtatgacccagactggaacccgagcacggacatgcaggcgcgggagcgggcgtggcgc
atcgggcagaagcgcgaggtgaccatctaccgcctgatcaccagcggcaccatcgaggag
aaggtctaccaccgccagatctacaaacagttcctcaccgaaaaggtgctgcaggaccca
aagcagaagcgcttcttcaagagcaaggacatccacgacctcttcacgctgggcgaccag
tacgcgggcgcctctgagaccgcccacatcttctcctccctccacggcggcctcgaagtg
cccctcgaccccgattcggtcgccgtccccgctgaggcagccggccctgcaggcgaggtg
gatgacgcgaagatactgagggatttgttcgaggggacgggagtgatgagcgcgctggac
cactccaagatcgagggcgccaacaaccccgaggctctcaacatcgatgcacaggccgcc
cgcatcgcccgccgcgccgctgccgcgctgcgccagtcacgcgccgcctgcgtgactgcg
ccggtcaaccagccgacgtggacaggcaggtccggcggcagcggggcgccgcgcttcggg
gcgacgtccaaccagcggctggcgcgcggcgccttgtccgagcccggcagctcggaggcg
gccccggccgacgctggtgccggcgaggtgcgtcggggcaccgccgggctcgcccgattt
ggcggcggccaggccggcaccacgggcgggctcgcgccgagcagctccgtgcttctggcg
cggctgcgcgagcggcaggcggccgtcagtgcagccgcctcgtccgccgcgcgcaacgac
cctgaggttgaggaggcgcacgagctgagtcagcgcattgtggcgtacctggaggaggca
ggcggccaggcggacagccatgcggtcattcagcatttcgcgccgagcctgcctgcagcc
aaagccccgctcttccggcagctcctgcagcaggtggccagcctgcggcgcaatccgtct
gctggcaagatatgggtgctgcgtcctgattttgtgacggatcggtga

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